RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LPAR6P43657 344 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 LINC00205P59089 165 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 OR2F1Q13607 317 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 ZNF345Q14585 488 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 KCNRGQ8N5I3 272 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 MIOXQ9UGB7 285 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 TRBV23-1A0A0A0MS06 115 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 A0A0G2JRQ6 117 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 CLEC18AA5D8T8 446 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 C17orf98A8MV24 154 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 F12P00748 615 aaPredicted RBP18.78■□□□□ 0.6
PTX3-201ENST00000295927 GNG10P50151 68 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 BRWD1-AS2P59051 145 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 SRSF1Q07955 248 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTX3-201ENST00000295927 TMEM155Q4W5P6 130 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 RPL39P5Q59GN2 51 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 CLEC18CQ8NCF0 446 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 OR8H1Q8NGG4 311 aa18.78■□□□□ 0.6
PTX3-201ENST00000295927 RRNAD1Q96FB5 475 aaKnown RBP18.78■□□□□ 0.6
PTX3-201ENST00000295927 SPTAN1Q13813 2472 aaKnown RBP18.77■□□□□ 0.6
PTX3-201ENST00000295927 K7EPK0 472 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 DEDDO75618 318 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 DUTP33316 252 aaKnown RBP18.77■□□□□ 0.6
PTX3-201ENST00000295927 DLX6P56179 175 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 TMEM33P57088 247 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 SMCO1Q147U7 214 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 SPAG16Q8N0X2 631 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 FAM71E2Q8N5Q1 922 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 OR8B3Q8NGG8 313 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 NEIL1Q96FI4 390 aaPredicted RBP18.77■□□□□ 0.6
PTX3-201ENST00000295927 OR8B2Q96RD0 313 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 GAB2Q9UQC2 676 aa18.77■□□□□ 0.6
PTX3-201ENST00000295927 M0R1X1 148 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 IGKV1-5P01602 117 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 RLN2P04090 185 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 TLE4Q04727 773 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 THOC7Q6I9Y2 204 aaKnown RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 TCTEX1D1Q8N7M0 179 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 LSM10Q969L4 123 aaKnown RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 GPR146Q96CH1 333 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 EFNA4P52798 201 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 ZNF816Q0VGE8 651 aaPredicted RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 NCR3LG1Q68D85 454 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 TEX261Q6UWH6 196 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 C1orf229Q6ZS94 237 aaPredicted RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 SLC25A48Q6ZT89 311 aaKnown RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 ODF3L1Q8IXM7 274 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 RNASE11Q8TAA1 199 aaKnown RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 FAM212BQ9NTI7 297 aaPredicted RBP18.76■□□□□ 0.59
PTX3-201ENST00000295927 U3KQ87 197 aa18.76■□□□□ 0.59
PTX3-201ENST00000295927 OVOL3O00110 214 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 GPR37O15354 613 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 ST8SIA3O43173 380 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 EPHA1P21709 976 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 AKR1C2P52895 323 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 LYG1Q8N1E2 194 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 ZFP57Q9NU63 452 aa18.75■□□□□ 0.59
PTX3-201ENST00000295927 UBR5O95071 2799 aaPredicted RBP18.75■□□□□ 0.59
PTX3-201ENST00000295927 SAA2-SAA4A0A096LPE2 208 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 MSGN1A6NI15 193 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 RAB29O14966 203 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 SAA2P0DJI9 122 aaPredicted RBP18.74■□□□□ 0.59
PTX3-201ENST00000295927 WDR25Q64LD2 544 aaPredicted RBP18.74■□□□□ 0.59
PTX3-201ENST00000295927 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.74■□□□□ 0.59
PTX3-201ENST00000295927 POMT1Q9Y6A1 747 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 MALRD1Q5VYJ5 2156 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 COL12A1Q99715 3063 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 A0A1B0GU03 582 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 S1PR2O95136 353 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 NKX2-1P43699 371 aaPredicted RBP18.74■□□□□ 0.59
PTX3-201ENST00000295927 IZUMO4Q1ZYL8 232 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 ZNF680Q8NEM1 530 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 ZNF251Q9BRH9 671 aa18.74■□□□□ 0.59
PTX3-201ENST00000295927 SLC25A6P12236 298 aa18.73■□□□□ 0.59
PTX3-201ENST00000295927 NUP62P37198 522 aaPredicted RBP18.73■□□□□ 0.59
PTX3-201ENST00000295927 CXorf66Q5JRM2 361 aaPredicted RBP18.73■□□□□ 0.59
PTX3-201ENST00000295927 Q6ZRM9 215 aa18.73■□□□□ 0.59
PTX3-201ENST00000295927 ZNF767PQ75MW2 155 aa18.73■□□□□ 0.59
PTX3-201ENST00000295927 RAB39BQ96DA2 213 aa18.73■□□□□ 0.59
PTX3-201ENST00000295927 AQP10Q96PS8 301 aa18.73■□□□□ 0.59
PTX3-201ENST00000295927 ZNRD1Q9P1U0 126 aa18.73■□□□□ 0.59
PTX3-201ENST00000295927 CFDP00746 253 aaPredicted RBP18.72■□□□□ 0.59
PTX3-201ENST00000295927 GPR6P46095 362 aaPredicted RBP18.72■□□□□ 0.59
PTX3-201ENST00000295927 PATZ1Q9HBE1 687 aaKnown RBP18.72■□□□□ 0.59
PTX3-201ENST00000295927 RCL1Q9Y2P8 373 aaKnown RBP18.72■□□□□ 0.59
PTX3-201ENST00000295927 KANTRA0A1W2PQU2 76 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 PITX3O75364 302 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 C11orf42Q8N5U0 333 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 CD300LFQ8TDQ1 290 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 IGFBPL1Q8WX77 278 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 NARFLQ9H6Q4 476 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 CACNG5Q9UF02 275 aa18.72■□□□□ 0.59
PTX3-201ENST00000295927 E5RGE8 158 aa18.71■□□□□ 0.59
PTX3-201ENST00000295927 BCL2L11O43521 198 aa18.71■□□□□ 0.59
PTX3-201ENST00000295927 DMBX1Q8NFW5 382 aa18.71■□□□□ 0.59
PTX3-201ENST00000295927 NSG2Q9Y328 171 aa18.71■□□□□ 0.59
PTX3-201ENST00000295927 FCGR3BO75015 233 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 KRASP01116 189 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 IGHV1-8P0DP01 117 aa18.7■□□□□ 0.58
PTX3-201ENST00000295927 HKR1P10072 659 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms