RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CST9LP1Q5W188 147 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 NUFIP2Q7Z417 695 aaKnown RBP13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TGIF2LYQ8IUE0 185 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OR2M7Q8NG81 312 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PLPPR1Q8TBJ4 325 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 IL22RA2Q969J5 263 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 DEFB127Q9H1M4 99 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SLC7A10Q9NS82 523 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PAM16Q9Y3D7 125 aa13.56□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SYNGR3O43761 229 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 GFRA1P56159 465 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 RNFT1Q5M7Z0 435 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TOMM20LQ6UXN7 152 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OR1F12Q8NHA8 337 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 A0A096LPE4 126 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 A0A1W2PPZ6 126 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 IFNA5P01569 189 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CRYGSP22914 178 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 IL24Q13007 206 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 MRPL52Q86TS9 123 aaKnown RBP13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SMIM7Q9BQ49 75 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 GAL3ST2Q9H3Q3 398 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 RBKSQ9H477 322 aa13.55□□□□□ -0.24
MAP1LC3B-201ENST00000268607 IGKV1-12A0A0C4DH73 117 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 K7EM74 188 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 IGKV1D-12P01611 117 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CHRNB4P30926 498 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CEACAM8P31997 349 aaPredicted RBP13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CNN1P51911 297 aaKnown RBP13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 FOXG1P55316 489 aaPredicted RBP13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 COL5A1-AS1Q5SY13 56 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CALHM1Q8IU99 346 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OR5B12Q96R08 314 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 Q9N2K0 584 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PRSS50Q9UI38 385 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ST3GAL6Q9Y274 331 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 C20orf202A1L168 122 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 H7BYZ3 331 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CCL25O15444 150 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CCL2P13500 99 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CCNOP22674 350 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PLA2G5P39877 138 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PLGLB1Q02325 96 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 NMSQ5H8A3 153 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TTTY12Q9BZ98 90 aa13.54□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ITGB1BP1O14713 200 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 SOX8P57073 446 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 GAPTQ8N292 157 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZCCHC14Q8WYQ9 949 aaKnown RBP13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZNF442Q9H7R0 627 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 GPR35Q9HC97 309 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 NAT8Q9UHE5 227 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 BOKQ9UMX3 212 aaPredicted RBP13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PCNX1Q96RV3 2341 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ACOT6Q3I5F7 207 aaPredicted RBP13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OSR2Q8N2R0 312 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 CPT1CQ8TCG5 803 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 RPUSD4Q96CM3 377 aaKnown RBP13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 P2RX4Q99571 388 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TAAR3PQ9P1P4 343 aa13.53□□□□□ -0.24
MAP1LC3B-201ENST00000268607 DNPH1O43598 174 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TNFSF13O75888 250 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 MEOX1P50221 254 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PTTG1IPP53801 180 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZNF92Q03936 586 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TMEM241Q24JQ0 296 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 TUSC5Q8IXB3 177 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 C20orf144Q9BQM9 153 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 ZNF703Q9H7S9 590 aaPredicted RBP13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 MSL2Q9HCI7 577 aa13.52□□□□□ -0.24
MAP1LC3B-201ENST00000268607 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MRPL33O75394 65 aaKnown RBP13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SP1P08047 785 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 VDAC1P21796 283 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 BSXQ3C1V8 233 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 LEMD1Q68G75 181 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 TMEM251Q8N6I4 163 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SCGB1C1Q8TD33 95 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 BORCS8Q96FH0 119 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ABHD14BQ96IU4 210 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 FAM173AQ9BQD7 235 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 OR6C3Q9NZP0 311 aa13.52□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ITPR1Q14643 2758 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 RPL23P62829 140 aaKnown RBP13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MALLQ13021 153 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 IZUMO4Q1ZYL8 232 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 MBD3L1Q8WWY6 194 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 SPSB1Q96BD6 273 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 IGKV1D-13A0A0B4J2D9 117 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 A0A0G2JRQ6 117 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 LILRA1O75019 489 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 ZNF737O75373 536 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 IGKV1-13P0DP09 117 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 HNF1AP20823 631 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 CDKN1BP46527 198 aa13.51□□□□□ -0.25
MAP1LC3B-201ENST00000268607 LHX2P50458 406 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms