RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 OR10G8Q8NGN5 311 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 LURAP1Q96LR2 239 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 CALYQ9NYX4 217 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 OR4A8P0C604 315 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 RSRP1Q9BUV0 290 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 PLSCR2Q9NRY7 297 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 JPT1Q9UK76 154 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 FCN1O00602 326 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 IL19Q9UHD0 177 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 IGKV1-9A0A0C4DH69 117 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 PUSL1Q8N0Z8 303 aaKnown RBP14.28□□□□□ -0.12
PHRF1-201ENST00000264555 SLC35E4Q6ICL7 350 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 LYZL4Q96KX0 146 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 RHOVQ96L33 236 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 DEPPQ9NTK1 212 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 LRRC3CA6NJW4 275 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 HSBP1O75506 76 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 DHRS11Q6UWP2 260 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 SEC14L6B5MCN3 397 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 PHOX2AO14813 284 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 TOX4O94842 621 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 BRS3P32247 399 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 WDR73Q6P4I2 378 aa14.28□□□□□ -0.12
PHRF1-201ENST00000264555 C1orf162Q8NEQ5 155 aaPredicted RBP14.28□□□□□ -0.12
PHRF1-201ENST00000264555 ZNF716A6NP11 495 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 TAF15Q92804 592 aaKnown RBP eCLIP14.27□□□□□ -0.126e-6■■□□□ 12.5
PHRF1-201ENST00000264555 HSPB1P04792 205 aaKnown RBP14.27□□□□□ -0.12
PHRF1-201ENST00000264555 GLIPR1P48060 266 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 REG1BP48304 166 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 TNFRSF9Q07011 255 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 FAM209AQ5JX71 171 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 ZNF319Q9P2F9 582 aa14.27□□□□□ -0.12
PHRF1-201ENST00000264555 DANCRP0C864 163 aa14.27□□□□□ -0.13
PHRF1-201ENST00000264555 HIST1H3AP68431 136 aa14.27□□□□□ -0.13
PHRF1-201ENST00000264555 ELOA3CA0A087WX78 387 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-201ENST00000264555 SFTPCP11686 197 aa14.27□□□□□ -0.13
PHRF1-201ENST00000264555 PAQR4Q8N4S7 273 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-201ENST00000264555 WDYHV1Q96HA8 205 aa14.27□□□□□ -0.13
PHRF1-201ENST00000264555 KLHDC3Q9BQ90 382 aa14.27□□□□□ -0.13
PHRF1-201ENST00000264555 A0A1W2PRD5 423 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 A0A1W2PRF3 423 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 A0A1W2PRM7 423 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 FAM74A7A6NL05 159 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 IFNL4K9M1U5 179 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 ZNF273Q14593 569 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 RTP5Q14D33 572 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 C10orf113Q5VZT2 155 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 FAM89BQ8N5H3 189 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 DRAM1Q8N682 238 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 OR4X1Q8NH49 305 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 PRR7Q8TB68 274 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 C1RLQ9NZP8 487 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 SPINK4O60575 86 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 KRTDAPP60985 99 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 STXBP6Q8NFX7 210 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 SMIM8Q96KF7 97 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 SVILO95425 2214 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 PQLC2LA1A4F0 135 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 FAM157AC9JC47 383 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 PGA5P0DJD9 388 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 TIMM23BQ5SRD1 257 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 IDI2-AS1Q9NZ38 188 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 RND3P61587 244 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 VWA1Q6PCB0 445 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 CACNA1EQ15878 2313 aa14.26□□□□□ -0.13
PHRF1-201ENST00000264555 MARCH11A6NNE9 402 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 MC5RP33032 325 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 MEOX2P50222 304 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 SUMO1P63165 101 aaKnown RBP14.25□□□□□ -0.13
PHRF1-201ENST00000264555 OR4C12Q96R67 309 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 MPZP25189 248 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 DOLPP1Q86YN1 238 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 NDUFA2O43678 99 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 FAM157CP0CG43 387 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 RD3LP0DJH9 198 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 IQCJQ1A5X6 159 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 VOPP1Q96AW1 172 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 KIAA1324LA8MWY0 1029 aaPredicted RBP14.25□□□□□ -0.13
PHRF1-201ENST00000264555 RHBDL1O75783 438 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 TMPRSS3P57727 454 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 KHDC1LQ5JSQ8 128 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 SPNS3Q6ZMD2 512 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 ZIC4Q8N9L1 334 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 ZDHHC16Q969W1 377 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 PERPQ96FX8 193 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 IFT22Q9H7X7 185 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 FOXD3Q9UJU5 478 aaPredicted RBP14.25□□□□□ -0.13
PHRF1-201ENST00000264555 PXMP4Q9Y6I8 212 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 NSUN5P2Q63ZY6 315 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 ZNF596Q8TC21 504 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 TLNRD1Q9H1K6 362 aa14.25□□□□□ -0.13
PHRF1-201ENST00000264555 HELTA6NFD8 242 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 SRSF10O75494 262 aaKnown RBP14.24□□□□□ -0.13
PHRF1-201ENST00000264555 NEURL1O76050 574 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 CECR9P0C854 216 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 COX19Q49B96 90 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 ASCL3Q9NQ33 180 aa14.24□□□□□ -0.13
PHRF1-201ENST00000264555 SPTA1P02549 2419 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms