RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
VAMP7-201ENST00000262640 GRPEL2Q8TAA5 225 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 SPIN2AQ99865 258 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 SPIN2BQ9BPZ2 258 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 BPESC1Q9GZL8 116 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 LRRK2Q5S007 2527 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 SAA2-SAA4A0A096LPE2 208 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 HMSDA8MTL9 139 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 C22orf46C9J442 243 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 NDUFS8O00217 210 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 PROP1O75360 226 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 MPC2O95563 127 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 SAA2P0DJI9 122 aaPredicted RBP10.66□□□□□ -0.7
VAMP7-201ENST00000262640 SLC25A4P12235 298 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 PAX1P15863 534 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 LRRC37A5PQ49AS3 106 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 ODF3L1Q8IXM7 274 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 LYG1Q8N1E2 194 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 C11orf42Q8N5U0 333 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 LINC00311Q8N616 119 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 ZNF596Q8TC21 504 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 CD300LFQ8TDQ1 290 aa10.66□□□□□ -0.7
VAMP7-201ENST00000262640 FXYD6-FXYD2A0A087WZ82 144 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 LAMTOR1Q6IAA8 161 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 SPAG16Q8N0X2 631 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 THAP6Q8TBB0 222 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 FAM168AQ92567 244 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 S1PR3Q99500 378 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 PIMREGQ9BSJ6 248 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 TMEM133Q9H2Q1 129 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 LINC00473A8K010 186 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 IGKV1-39P01597 117 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 IGKV1D-39P04432 117 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 SSTR2P30874 369 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 KIR2DS2P43631 304 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 LPAR6P43657 344 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 OR9G1Q8NH87 305 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 ADTRPQ96IZ2 230 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 ZNF251Q9BRH9 671 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
VAMP7-201ENST00000262640 J3QR06 171 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 ATG12O94817 140 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 PET100P0DJ07 73 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 COL8A1P27658 744 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 THBS3P49746 956 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 THOC7Q6I9Y2 204 aaKnown RBP10.64□□□□□ -0.71
VAMP7-201ENST00000262640 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 CLEC2AQ6UVW9 174 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 CLDND2Q8NHS1 167 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 C10orf105Q8TEF2 133 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 LSM10Q969L4 123 aaKnown RBP10.64□□□□□ -0.71
VAMP7-201ENST00000262640 ONECUT1Q9UBC0 465 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 PRELID3BQ9Y3B1 194 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 KIAA1324LA8MWY0 1029 aaPredicted RBP10.64□□□□□ -0.71
VAMP7-201ENST00000262640 M0R1W7 72 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 OR2B11Q5JQS5 317 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 NCR3LG1Q68D85 454 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 ABHD12Q8N2K0 398 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 RNASE11Q8TAA1 199 aaKnown RBP10.64□□□□□ -0.71
VAMP7-201ENST00000262640 TNFRSF14Q92956 283 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 GSX2Q9BZM3 304 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 ZFP57Q9NU63 452 aa10.64□□□□□ -0.71
VAMP7-201ENST00000262640 MALRD1Q5VYJ5 2156 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 A8MXK9 166 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.71
VAMP7-201ENST00000262640 RAMP3O60896 148 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 SLC25A6P12236 298 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 AKR1C2P52895 323 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 BRWD1-AS2P59051 145 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 LMO4P61968 165 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 RAB32Q13637 225 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 ZNF546Q86UE3 836 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 OR10X1Q8NGY0 326 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 RRNAD1Q96FB5 475 aaKnown RBP10.63□□□□□ -0.71
VAMP7-201ENST00000262640 PLSCR3Q9NRY6 295 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 MBD2Q9UBB5 411 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 BOLA1Q9Y3E2 137 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 A0A1B0GU03 582 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 ARPC5O15511 151 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 ENSAO43768 121 aaKnown RBP10.63□□□□□ -0.71
VAMP7-201ENST00000262640 DSCR9P59020 149 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 S100A10P60903 97 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 ZNF816Q0VGE8 651 aaPredicted RBP10.63□□□□□ -0.71
VAMP7-201ENST00000262640 LGALSLQ3ZCW2 172 aaPredicted RBP10.63□□□□□ -0.71
VAMP7-201ENST00000262640 FAM71F2Q6NXP2 309 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 PRSS54Q6PEW0 395 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 C1orf229Q6ZS94 237 aaPredicted RBP10.63□□□□□ -0.71
VAMP7-201ENST00000262640 KIR3DL3Q8N743 410 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 OR4D5Q8NGN0 318 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 DDB2Q92466 427 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 NRGNQ92686 78 aa10.63□□□□□ -0.71
VAMP7-201ENST00000262640 TOR1AO14656 332 aa10.62□□□□□ -0.71
VAMP7-201ENST00000262640 S1PR2O95136 353 aa10.62□□□□□ -0.71
VAMP7-201ENST00000262640 IGKV1-5P01602 117 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms