RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 FAM90A27PA6NNH2 459 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 E7EQL1 145 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 APOBEC3AP31941 199 aaPredicted RBP19.29■□□□□ 0.68
MSX2-201ENST00000239243 RAB5CP51148 216 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 TAS2R30P59541 319 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 ZNF816Q0VGE8 651 aaPredicted RBP19.29■□□□□ 0.68
MSX2-201ENST00000239243 OR5C1Q8NGR4 320 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 ZNF729A6NN14 1252 aaPredicted RBP19.29■□□□□ 0.68
MSX2-201ENST00000239243 C17orf98A8MV24 154 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 CLDN14O95500 239 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 C1QTNF9P0C862 333 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 OMGP23515 440 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 EFNB3Q15768 340 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 C17orf58Q2M2W7 97 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 OR2B11Q5JQS5 317 aa19.29■□□□□ 0.68
MSX2-201ENST00000239243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.28■□□□□ 0.68
MSX2-201ENST00000239243 FAM216BQ8N7L0 139 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 CORO2AQ92828 525 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 GFOD1Q9NXC2 390 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 GAB2Q9UQC2 676 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 ICE1Q9Y2F5 2266 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 TXNL1O43396 289 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 KRASP01116 189 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 CLINT1Q14677 625 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 TUSC1Q2TAM9 212 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 MST1LQ2TV78 715 aa19.28■□□□□ 0.68
MSX2-201ENST00000239243 RAI1Q7Z5J4 1906 aaPredicted RBP19.27■□□□□ 0.68
MSX2-201ENST00000239243 PPIAL4EA0A075B759 164 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 LINC00473A8K010 186 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 B9A039 149 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 PPIAL4DF5H284 164 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 CST7O76096 145 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 S1PR2O95136 353 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 P0C879 139 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 PPIAL4FP0DN26 164 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 DUTP33316 252 aaKnown RBP19.27■□□□□ 0.68
MSX2-201ENST00000239243 SULT1A1P50225 295 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 DYNLT3P51808 116 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 F2RL1P55085 397 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 PJVKQ0ZLH3 352 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 PPIAL4AQ9Y536 164 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 POLEQ07864 2286 aa19.27■□□□□ 0.68
MSX2-201ENST00000239243 TMEM178BH3BS89 294 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 TMPRSS2O15393 492 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 DFFBO76075 338 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 G6PCP35575 357 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 BRWD1-AS2P59051 145 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 DUX4L9Q6RFH8 374 aaPredicted RBP19.27■□□□□ 0.67
MSX2-201ENST00000239243 TGIF2LYQ8IUE0 185 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 ZCCHC24Q8N2G6 241 aaKnown RBP19.27■□□□□ 0.67
MSX2-201ENST00000239243 HSD17B11Q8NBQ5 300 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 LINC00574Q9H8X3 128 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.27■□□□□ 0.67
MSX2-201ENST00000239243 DCAF16Q9NXF7 216 aa19.27■□□□□ 0.67
MSX2-201ENST00000239243 SPTBN4Q9H254 2564 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 hADV38S2A0JD32 116 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 RAB29O14966 203 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 DANCRP0C864 163 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 ODF3L1Q8IXM7 274 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 ABHD14AQ9BUJ0 271 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 HRH4Q9H3N8 390 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 TMEM106BQ9NUM4 274 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 PSENENQ9NZ42 101 aa19.26■□□□□ 0.67
MSX2-201ENST00000239243 STRAPQ9Y3F4 350 aaKnown RBP19.26■□□□□ 0.67
MSX2-201ENST00000239243 CRYZL1O95825 349 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 Q6ZRG5 221 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.25■□□□□ 0.67
MSX2-201ENST00000239243 ZCCHC14Q8WYQ9 949 aaKnown RBP19.25■□□□□ 0.67
MSX2-201ENST00000239243 ATP5SQ99766 215 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 IFI27L2Q9H2X8 130 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 TANC2Q9HCD6 1990 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 TNFRSF9Q07011 255 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 H2BFWTQ7Z2G1 175 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 ZNF295-AS1Q8N0V1 137 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 TMEM217Q8N7C4 229 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 BPIFCQ8NFQ6 507 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 KCNJ16Q9NPI9 418 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 IDI2-AS1Q9NZ38 188 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 PLA2G2EQ9NZK7 142 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 HSPB7Q9UBY9 170 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 DSCAML1Q8TD84 2053 aa19.25■□□□□ 0.67
MSX2-201ENST00000239243 RBFOX2O43251 390 aaKnown RBP eCLIP19.24■□□□□ 0.67
MSX2-201ENST00000239243 KIR2DS2P43631 304 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 UBE2KP61086 200 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 MEF2CQ06413 473 aaPredicted RBP19.24■□□□□ 0.67
MSX2-201ENST00000239243 UNQ6494/PRO21346Q6UXR6 183 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 LINC01560Q8TB33 94 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 GNPNAT1Q96EK6 184 aaPredicted RBP19.24■□□□□ 0.67
MSX2-201ENST00000239243 NARS2Q96I59 477 aaKnown RBP19.24■□□□□ 0.67
MSX2-201ENST00000239243 NARFLQ9H6Q4 476 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 SLC25A10Q9UBX3 287 aaPredicted RBP19.24■□□□□ 0.67
MSX2-201ENST00000239243 PRELID3BQ9Y3B1 194 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 LINC00312Q9Y6C7 94 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 M0R1X1 148 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 DLL1O00548 723 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 MIDNQ504T8 468 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 BTNL8Q6UX41 500 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 CCL17Q92583 94 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 NEUROG1Q92886 237 aa19.24■□□□□ 0.67
MSX2-201ENST00000239243 SPTA1P02549 2419 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms