RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ZNF610Q8N9Z0 462 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 STARD4Q96DR4 205 aa18.39■□□□□ 0.53
SMARCD2-201ENST00000225742 SPAARA0A1B0GVQ0 90 aa18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 ODAMA1E959 279 aa18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 NDUFS6O75380 124 aaKnown RBP18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 KRASP01116 189 aa18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 ADAM5Q6NVV9 412 aa18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 TCEAL7Q9BRU2 100 aa18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 UFSP2Q9NUQ7 469 aa18.38■□□□□ 0.53
SMARCD2-201ENST00000225742 MBD3L4A6NDZ8 208 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 MBD3L3A6NE82 208 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 MBD3L5A6NJ08 208 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 C17orf98A8MV24 154 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 EIF3GO75821 320 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 WISP2O76076 250 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 S1PR2O95136 353 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 MBP02144 154 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 CFHR2P36980 270 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 GLIPR1P48060 266 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 CEBPGP53567 150 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 ZNF816Q0VGE8 651 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 OR13A1Q8NGR1 328 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 MBD3L2Q8NHZ7 208 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 PPP1R35Q8TAP8 253 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 LRRC29Q8WV35 223 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 EDARADDQ8WWZ3 215 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 VSIRQ9H7M9 311 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 MSL2Q9HCI7 577 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 VAX2Q9UIW0 290 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 NCOR1O75376 2440 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 IGHV2-5P01817 119 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 WT1P19544 449 aaPredicted RBP18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 PRDX2P32119 198 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 C3orf36Q3SXR2 165 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 LCN15Q6UWW0 184 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 H2BFWTQ7Z2G1 175 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 DKK4Q9UBT3 224 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 SLC25A15Q9Y619 301 aa18.37■□□□□ 0.53
SMARCD2-201ENST00000225742 UBE2L5PA0A1B0GUS4 154 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 MAP1LC3B2A6NCE7 125 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 FAM90A9PA6NNJ1 464 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 C15orf65H3BRN8 121 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 FBP1P09467 338 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 SMIM6P0DI80 62 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 GZMHP20718 246 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 BRWD1-AS2P59051 145 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 KIAA2026Q5HYC2 2103 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 FAM90A2PQ658T7 463 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 RBMS3Q6XE24 437 aaKnown RBP18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 ZADH2Q8N4Q0 377 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 MAP1LC3BQ9GZQ8 125 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 ZNF665Q9H7R5 613 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 PARD6AQ9NPB6 346 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 FRYLO94915 3013 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 FAM186AA6NE01 2351 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 CACNA1GO43497 2377 aa18.36■□□□□ 0.53
SMARCD2-201ENST00000225742 CR1LQ2VPA4 569 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 DEFB109BQ30KR1 87 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 OR8G2PQ6IF36 304 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 CD177Q8N6Q3 437 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 DTD1Q8TEA8 209 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 OPN3Q9H1Y3 402 aaPredicted RBP18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 TMEM242Q9NWH2 141 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 METRNQ9UJH8 293 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 VPS13AQ96RL7 3174 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 SRRM5B3KS81 715 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 AP4M1O00189 453 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 ZNF737O75373 536 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 RAB11AP62491 216 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 VWC2Q2TAL6 325 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 OR10P1Q8NGE3 313 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 CA5BP1Q8WTZ4 195 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 SNX22Q96L94 193 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 SLC39A9Q9NUM3 307 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 FZR1Q9UM11 496 aa18.35■□□□□ 0.53
SMARCD2-201ENST00000225742 ZFP92A6NM28 416 aa18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 PMS2P5A8MQ11 134 aa18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 S100A9P06702 114 aaKnown RBP18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 SSTR5P35346 364 aa18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 OR2B11Q5JQS5 317 aa18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 NCOR1P1Q9H4R4 102 aa18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 JPT1Q9UK76 154 aa18.34■□□□□ 0.53
SMARCD2-201ENST00000225742 PCP4L1A6NKN8 68 aa18.33■□□□□ 0.53
SMARCD2-201ENST00000225742 MGST3O14880 152 aa18.33■□□□□ 0.53
SMARCD2-201ENST00000225742 GNB2P62879 340 aa18.33■□□□□ 0.53
SMARCD2-201ENST00000225742 AGMATQ9BSE5 352 aa18.33■□□□□ 0.53
SMARCD2-201ENST00000225742 CLN8Q9UBY8 286 aa18.33■□□□□ 0.53
SMARCD2-201ENST00000225742 PSG11Q9UQ72 335 aa18.33■□□□□ 0.53
SMARCD2-201ENST00000225742 A0A1W2PPE3 182 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 ZNF727A8MUV8 499 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 FABP9Q0Z7S8 132 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 ELOBQ15370 118 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 Q3ZCU0 254 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 AARDQ4LEZ3 155 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 BTNL3Q6UXE8 466 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 SSX7Q7RTT5 188 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 OR2Z1Q8NG97 314 aa18.33■□□□□ 0.52
SMARCD2-201ENST00000225742 CTXND1A0A1B0GTU2 59 aa18.32■□□□□ 0.52
SMARCD2-201ENST00000225742 YPEL1O60688 119 aa18.32■□□□□ 0.52
SMARCD2-201ENST00000225742 GPR12P47775 334 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms