RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TMEM37Q8WXS4 190 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 TMEM56Q96MV1 263 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 TMEM56-RWDD3S4R434 201 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 C12orf77C9JDV5 145 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 DKK1O94907 266 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 S1PR2O95136 353 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 TFF1P04155 84 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 BCL2P10415 239 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 MPV17P39210 176 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 MRPS11P82912 194 aaKnown RBP10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 MYPOPQ86VE0 399 aaPredicted RBP10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 OR10D4PQ8NGN7 298 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 SSMEM1Q8WWF3 244 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 LRFN3Q9BTN0 628 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 PATZ1Q9HBE1 687 aaKnown RBP10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 SPRR3Q9UBC9 169 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 HIST1H2BAQ96A08 127 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 SPSB4Q96A44 273 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 RBKSQ9H477 322 aa10.48□□□□□ -0.73
TM9SF4-201ENST00000217315 GTF3C1Q12789 2109 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 PAGE4O60829 102 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 CLDN14O95500 239 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 IL18BPO95998 194 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 ADH4P08319 380 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 CECR9P0C854 216 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 MGST1P10620 155 aaKnown RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 MDKP21741 143 aaPredicted RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 SERF2P84101 59 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 P2RY6Q15077 328 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 BSXQ3C1V8 233 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 ZNF645Q8N7E2 425 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 RBMXL3Q8N7X1 1067 aaKnown RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 LRTM2Q8N967 370 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 TAF15Q92804 592 aaKnown RBP eCLIP10.47□□□□□ -0.731e-7■□□□□ 8.1
TM9SF4-201ENST00000217315 SLX1AQ9BQ83 275 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 SMDT1Q9H4I9 107 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 AURKAIP1Q9NWT8 199 aaPredicted RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 TSTD3H0UI37 97 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 ZG16O60844 167 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 EIF2S3P41091 472 aaKnown RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 TNFRSF9Q07011 255 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 TMEM108Q6UXF1 575 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 CDH23Q9H251 3354 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 HRASP01112 189 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 ZNF66Q6ZN08 573 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 ACY3Q96HD9 319 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 TIMM8BQ9Y5J9 83 aaPredicted RBP10.47□□□□□ -0.73
TM9SF4-201ENST00000217315 AHRRA9YTQ3 701 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 NAPSAO96009 420 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 CCL8P80075 99 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 DEFA6Q01524 100 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 OR4D5Q8NGN0 318 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 OR4S2Q8NH73 311 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 LEAP2Q969E1 77 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 SAMD10Q9BYL1 202 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 USF3Q68DE3 2245 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 ZNF320A2RRD8 509 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 FABP4P15090 132 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 ZNF880Q6PDB4 577 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 ITLN1Q8WWA0 313 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 SH2D2AQ9NP31 389 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
TM9SF4-201ENST00000217315 TRGV8A0A0C4DH27 118 aa10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 ODAMA1E959 279 aa10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 F6UZH7 168 aa10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 RAB7AP51149 207 aa10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 LSM10Q969L4 123 aaKnown RBP10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 SLC35E1Q96K37 410 aa10.46□□□□□ -0.74
TM9SF4-201ENST00000217315 MGST3O14880 152 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 ADCYAP1P18509 176 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 CCL20P78556 96 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 ID3Q02535 119 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNRF1Q8ND25 227 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 IFT22Q9H7X7 185 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 GP6Q9HCN6 339 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 EML6Q6ZMW3 1958 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 C11orf94C9JXX5 98 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 IGLV3-1P01715 115 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 GALR1P47211 349 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 ERHP84090 104 aaKnown RBP10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 ZNF90Q03938 601 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 FOXC1Q12948 553 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 SLC35E3Q7Z769 313 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 LINC00518Q8N0U6 118 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 C9orf106Q8NAJ2 232 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 CORO2AQ92828 525 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 RNF7Q9UBF6 113 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 CTXND1A0A1B0GTU2 59 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 YIF1AO95070 293 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 ASCL4Q6XD76 172 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 VKORC1L1Q8N0U8 176 aa10.45□□□□□ -0.74
TM9SF4-201ENST00000217315 RHOVQ96L33 236 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms