RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RBP2P50120 134 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 NDPQ00604 133 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 KLF5Q13887 457 aaPredicted RBP10.48□□□□□ -0.73
SNX1-214ENST00000625244 MMDQ15546 238 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 TRAM1Q15629 374 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 Q8N402 240 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 PARP16Q8N5Y8 322 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 DNAAF1Q8NEP3 725 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 OR51T1Q8NGJ9 327 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 RITA1Q96K30 269 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 PGLYRP3Q96LB9 341 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 OPALINQ96PE5 141 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 ACOT13Q9NPJ3 140 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 ETAA1Q9NY74 926 aa10.48□□□□□ -0.73
SNX1-214ENST00000625244 FOXA2Q9Y261 457 aaPredicted RBP10.48□□□□□ -0.73
SNX1-214ENST00000625244 LSM2Q9Y333 95 aaKnown RBP10.48□□□□□ -0.73
SNX1-214ENST00000625244 DEGS1O15121 323 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 TFAP2AP05549 437 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 PSMB9P28065 219 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 MTCP1P56278 107 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 LIPKQ5VXJ0 399 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 LINC00336Q6ZUF6 198 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 SPARTQ8N0X7 666 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 LINC00311Q8N616 119 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 CHST4Q8NCG5 386 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 OR10A7Q8NGE5 316 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 MS4A10Q96PG2 267 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 GPER1Q99527 375 aa10.47□□□□□ -0.73
SNX1-214ENST00000625244 A0A087WXM4 84 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 IGKV1-9A0A0C4DH69 117 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 TRBV5-5A0A0J9YX44 114 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 CSN3P07498 182 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 CPEP16870 476 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 PDZK1IP1Q13113 114 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 TPBGQ13641 420 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 OR13C5Q8NGS8 318 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 RFT1Q96AA3 541 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
SNX1-214ENST00000625244 OR14A2Q96R54 314 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 TAS2R4Q9NYW5 299 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 A3GALT2U3KPV4 340 aa10.46□□□□□ -0.73
SNX1-214ENST00000625244 OR11H12B2RN74 326 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 KDM4BO94953 1096 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 ZP3P21754 424 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 TPPP2P59282 170 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 TNFRSF9Q07011 255 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 ACSM3Q53FZ2 586 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 LYG2Q86SG7 212 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 TSPAN14Q8NG11 270 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 PHLDA1Q8WV24 401 aaPredicted RBP10.45□□□□□ -0.74
SNX1-214ENST00000625244 S100A13Q99584 98 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 NCOR1P1Q9H4R4 102 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 RANGRFQ9HD47 186 aaPredicted RBP10.45□□□□□ -0.74
SNX1-214ENST00000625244 ADAM30Q9UKF2 790 aa10.45□□□□□ -0.74
SNX1-214ENST00000625244 SLC31A2O15432 143 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 ARL6IP5O75915 188 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 IL3RAP26951 378 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 BDKRB2P30411 391 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 MECP2P51608 486 aaKnown RBP10.44□□□□□ -0.74
SNX1-214ENST00000625244 CRIP2P52943 208 aaPredicted RBP10.44□□□□□ -0.74
SNX1-214ENST00000625244 ACTBP60709 375 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 RPS11P62280 158 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNX1-214ENST00000625244 NEDD8Q15843 81 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 DDI2Q5TDH0 399 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 UBE2UQ5VVX9 321 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 RSBN1Q5VWQ0 802 aaPredicted RBP10.44□□□□□ -0.74
SNX1-214ENST00000625244 LIN54Q6MZP7 749 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 UBALD1Q8TB05 177 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 PHYHIPQ92561 330 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 TMEM203Q969S6 136 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 DERL3Q96Q80 235 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 NR1H4Q96RI1 486 aaPredicted RBP10.44□□□□□ -0.74
SNX1-214ENST00000625244 SLC2A8Q9NY64 477 aa10.44□□□□□ -0.74
SNX1-214ENST00000625244 TRAV24A0A0B4J272 114 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 ZNF785A8K8V0 405 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 TMEM225BP0DP42 221 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 EGR2P11161 476 aaPredicted RBP10.43□□□□□ -0.74
SNX1-214ENST00000625244 ZNF93P35789 620 aaPredicted RBP10.43□□□□□ -0.74
SNX1-214ENST00000625244 LSAMPQ13449 338 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 KISS1Q15726 138 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 HSD17B12Q53GQ0 312 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 PAN3Q58A45 887 aaKnown RBP10.43□□□□□ -0.74
SNX1-214ENST00000625244 CEACAM19Q7Z692 300 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 NKAIN3Q8N8D7 197 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 C8orf31Q8N9H6 132 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 OR5D18Q8NGL1 313 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 PLPPR1Q8TBJ4 325 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 BARHL1Q9BZE3 327 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 FAM192AQ9GZU8 254 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 SLC23A1Q9UHI7 598 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 NUBP2Q9Y5Y2 271 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
SNX1-214ENST00000625244 TRBV5-7A0A0A0MS05 114 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 IGHV3-43A0A0B4J1X8 118 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 ANKRD34BA5PLL1 514 aa10.42□□□□□ -0.74
SNX1-214ENST00000625244 TXNL1O43396 289 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms