RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ADCYAP1P18509 176 aa16.46■□□□□ 0.23
PCDHB11-202ENST00000624887 OR5C1Q8NGR4 320 aa16.46■□□□□ 0.23
PCDHB11-202ENST00000624887 ZNF835Q9Y2P0 537 aa16.46■□□□□ 0.23
PCDHB11-202ENST00000624887 C16orf97H3BN30 126 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 MGST3O14880 152 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 EDDM3AQ14507 147 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 C10orf91Q5T1B1 145 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 ZNF295-AS1Q8N0V1 137 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 SPAG16Q8N0X2 631 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 TREM1Q9NP99 234 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 UQCC1Q9NVA1 299 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 CACFD1Q9UGQ2 172 aa16.46■□□□□ 0.22
PCDHB11-202ENST00000624887 ZGRF1Q86YA3 2104 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 ATMQ13315 3056 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 ODAMA1E959 279 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 CST7O76096 145 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 ADH4P08319 380 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 MUC1P15941 1255 aaPredicted RBP16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 ID4P47928 161 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 DYNLT3P51808 116 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 ARHGDIBP52566 201 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 RPL23AP62750 156 aaKnown RBP16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 FGFRL1Q8N441 504 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 NUP37Q8NFH4 326 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 DCTN5Q9BTE1 182 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 ESRP2Q9H6T0 727 aaKnown RBP16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 STRAPQ9Y3F4 350 aaKnown RBP16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 WSB1Q9Y6I7 421 aa16.45■□□□□ 0.22
PCDHB11-202ENST00000624887 IGHV3OR15-7A0A075B7D8 119 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 GZMHP20718 246 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 RPL30P62888 115 aaKnown RBP16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 CATR1Q13166 79 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 CR1LQ2VPA4 569 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 TMEM108Q6UXF1 575 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 ZNF808Q8N4W9 903 aaPredicted RBP16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 RFESDQ8TAC1 157 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 TMEM231Q9H6L2 316 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 IL19Q9UHD0 177 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 MAP1BP46821 2468 aaKnown RBP16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 TXNL1O43396 289 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 SYNGR2O43760 224 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 SNRNP40Q96DI7 357 aaKnown RBP16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 TSNAXQ99598 290 aaKnown RBP16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 COA4Q9NYJ1 87 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 JKAMPQ9P055 326 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 NDRG3Q9UGV2 375 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 CARHSP1Q9Y2V2 147 aaKnown RBP16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 MMP24Q9Y5R2 645 aa16.44■□□□□ 0.22
PCDHB11-202ENST00000624887 IGHV3-43A0A0B4J1X8 118 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 F8W036 122 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 K7N7A8 449 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 IGHV1-46P01743 117 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 IGHV3-43DP0DP04 118 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 ATP6V0CP27449 155 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 STX12Q86Y82 276 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 TCTEX1D1Q8N7M0 179 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 NKX6-2Q9C056 277 aaPredicted RBP16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM96BQ9Y3D0 163 aa16.43■□□□□ 0.22
PCDHB11-202ENST00000624887 RNASEK-C17orf49H0YIS7 233 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 NUPL2O15504 423 aaKnown RBP16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 RAMP3O60896 148 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 CD5P06127 495 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 PTAFRP25105 342 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 CAMLGP49069 296 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 TNFAIP6P98066 277 aaPredicted RBP16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 SVBPQ8N300 66 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 TMEM217Q8N7C4 229 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM222BQ8WU58 562 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 AGMATQ9BSE5 352 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 SEC11CQ9BY50 192 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 GCM1Q9NP62 436 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 MEX3AA1L020 520 aaKnown RBP16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 AGPAT2O15120 278 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 TSPAN15O95858 294 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM87AP0C7U9 286 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 FHITP49789 147 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 SULT1A1P50225 295 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 ZNF616Q08AN1 781 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 MIDNQ504T8 468 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 ZNF66Q6ZN08 573 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 COMMD1Q8N668 190 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 ZNRF1Q8ND25 227 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 ATP5SQ99766 215 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 C19orf12Q9NSK7 152 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 RNF7Q9UBF6 113 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 SH3BGRL2Q9UJC5 107 aa16.42■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM74A7A6NL05 159 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM90A26D6RGX4 464 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 C1QL1O75973 258 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 PRH1P02810 166 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 P0C879 139 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 BRWD1-AS2P59051 145 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM74A3Q4VXF1 159 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 TMEM182Q6ZP80 229 aaPredicted RBP16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 FAM216AQ8WUB2 273 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 TCTEX1D2Q8WW35 142 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 EDARADDQ8WWZ3 215 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 JPT1Q9UK76 154 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 PSG11Q9UQ72 335 aa16.41■□□□□ 0.22
PCDHB11-202ENST00000624887 CEP295Q9C0D2 2601 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms