RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 WNT16Q9UBV4 365 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 HLA-HP01893 362 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 RBX1P62877 108 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 FAM90A2PQ658T7 463 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 ZNF787Q6DD87 383 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 ZDHHC23Q8IYP9 409 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 C11orf42Q8N5U0 333 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 SAP25Q8TEE9 199 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 GPR146Q96CH1 333 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 SDF2L1Q9HCN8 221 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 CISD1Q9NZ45 108 aaKnown RBP7.42□□□□□ -1.22
VCL-207ENST00000624354 RNF150Q9ULK6 438 aa7.42□□□□□ -1.22
VCL-207ENST00000624354 IGKV1-6A0A0C4DH72 117 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 A0A1W2PPQ1 181 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 ITGB1BP1O14713 200 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 IGHV3-9P01782 118 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 BCL2P10415 239 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 TMEM267Q0VDI3 215 aaPredicted RBP7.41□□□□□ -1.22
VCL-207ENST00000624354 LCN15Q6UWW0 184 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 COLCA1Q6ZS62 124 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 MRPL21Q7Z2W9 205 aaKnown RBP7.41□□□□□ -1.22
VCL-207ENST00000624354 NECAP1Q8NC96 275 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 OR2Y1Q8NGV0 311 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 OR51H1Q8NH63 302 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 TMEM170AQ8WVE7 144 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 HS3ST6Q96QI5 342 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 TBX15Q96SF7 602 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 ELOVL1Q9BW60 279 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
VCL-207ENST00000624354 OR2J1Q9GZK6 312 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 RPRMQ9NS64 109 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 MTCH1Q9NZJ7 389 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 IL36RNQ9UBH0 155 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 EML6Q6ZMW3 1958 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 A0A0G2JMM0 328 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 A0A0G2JRQ6 117 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 A0A1W2PPB8 328 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 A0A1W2PRS3 328 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 KIR3DP1A8MWS1 328 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 IL6RP08887 468 aaPredicted RBP7.41□□□□□ -1.22
VCL-207ENST00000624354 SLC25A6P12236 298 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 TNFSF10P50591 281 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 ERVS71-1P61550 626 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 CEACAM21Q3KPI0 293 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 KIAA2026Q5HYC2 2103 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 WIPI1Q5MNZ9 446 aaPredicted RBP7.41□□□□□ -1.22
VCL-207ENST00000624354 TGIF2LYQ8IUE0 185 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 RNASE8Q8TDE3 154 aaKnown RBP7.41□□□□□ -1.22
VCL-207ENST00000624354 ABHD3Q8WU67 409 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 OR5B12Q96R08 314 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 RSG1Q9BU20 258 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 ZNF665Q9H7R5 613 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 ZFP30Q9Y2G7 519 aa7.41□□□□□ -1.22
VCL-207ENST00000624354 B4E171 279 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 ZFP36L1Q07352 338 aaKnown RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 RNPS1Q15287 305 aaKnown RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 ACOT6Q3I5F7 207 aaPredicted RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 COL5A1-AS1Q5SY13 56 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 LYSMD4Q5XG99 296 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 PSMF1Q92530 271 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 WFIKKN1Q96NZ8 548 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 FUT9Q9Y231 359 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 OR2W1Q9Y3N9 320 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 ZNF292O60281 2723 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 MRPL33O75394 65 aaKnown RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 PFN1P07737 140 aaKnown RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 CD55P08174 381 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 RFPL3SP0C7P2 107 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 PSG2P11465 335 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 FOLR3P41439 243 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 FAM3BP58499 235 aaPredicted RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 NRN1LQ496H8 165 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 PCSK4Q6UW60 755 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 C16orf82Q7Z2V1 217 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 GBGT1Q8N5D6 347 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 IFI44Q8TCB0 444 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 CLDN23Q96B33 292 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 P2RX4Q99571 388 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 PYGO2Q9BRQ0 406 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 PLK3Q9H4B4 646 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 ERRFI1Q9UJM3 462 aaPredicted RBP7.4□□□□□ -1.22
VCL-207ENST00000624354 IGF2RP11717 2491 aa7.4□□□□□ -1.22
VCL-207ENST00000624354 C20orf202A1L168 122 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 C5orf49A4QMS7 147 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 IFNL4K9M1U5 179 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 LAMTOR5O43504 91 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 SYNGR2O43760 224 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 RAB7AP51149 207 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 ADIRFQ15847 76 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 ZNF845Q96IR2 970 aaPredicted RBP7.4□□□□□ -1.23
VCL-207ENST00000624354 MS4A10Q96PG2 267 aa7.4□□□□□ -1.23
VCL-207ENST00000624354 PSMG3Q9BT73 122 aaPredicted RBP7.4□□□□□ -1.23
VCL-207ENST00000624354 FGF23Q9GZV9 251 aaPredicted RBP7.4□□□□□ -1.23
VCL-207ENST00000624354 CD300LBA8K4G0 201 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 IFNA1P01562 189 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CCL4P13236 92 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 CCL2P13500 99 aa7.39□□□□□ -1.23
VCL-207ENST00000624354 HNF1AP20823 631 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms