RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZNF471Q9BX82 626 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM59Q9BXS4 323 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 PKIBQ9C010 78 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 SELENOIQ9C0D9 397 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TINAGL1Q9GZM7 467 aaPredicted RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 LPAR5Q9H1C0 372 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 C7orf69Q9H7B7 122 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TUBA4BQ9H853 241 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 UNKLQ9H9P5 680 aaKnown RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 LPAR2Q9HBW0 351 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 HES4Q9HCC6 221 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 MMP26Q9NRE1 261 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF581Q9P0T4 197 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 C14orf166Q9Y224 244 aaKnown RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 TMA7Q9Y2S6 64 aaKnown RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 CARHSP1Q9Y2V2 147 aaKnown RBP4.34□□□□□ -1.71
SHMT1-211ENST00000618902 KPTNQ9Y664 436 aa4.34□□□□□ -1.71
SHMT1-211ENST00000618902 LOC105371242A0A075B767 164 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 TRBV23-1A0A0A0MS06 115 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 A0A1B0GUS0 222 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 A0A1W2PP11 408 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A10PA6NDY2 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A18PA6NE21 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A16PA6NEW6 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM235A6NFC5 223 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A20PA6NIJ5 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A8PA6NJQ4 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A7PA6NKC0 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A22PA8MWA6 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A12PA8MX19 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A5PA8MXJ8 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A23PA8MXZ1 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 TRIM77I1YAP6 450 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 TSPAN4O14817 238 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ADAM20O43506 726 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ATG12O94817 140 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 SPDEFO95238 335 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FSHBP01225 129 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 RBP4P02753 201 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 CTSDP07339 412 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 SFTPBP07988 381 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A15PP0C7V4 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A13PP0C7W8 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A14PP0C7W9 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM90A24PP0C7X0 464 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 RPS2P15880 293 aaKnown RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ATF4P18848 351 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 DUSP1P28562 367 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 HRH1P35367 487 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 OR3A4PP47883 348 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 RBP2P50120 134 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 UCP3P55916 312 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 MTCP1P56278 107 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 HILS1P60008 231 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 LCN2P80188 198 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 PJVKQ0ZLH3 352 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 IL24Q13007 206 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 IL15RAQ13261 267 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 BTN1A1Q13410 526 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 PPP1R1AQ13522 171 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ARFRP1Q13795 201 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 KISS1Q15726 138 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 SMIM21Q3B7S5 101 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 RNF212Q495C1 297 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 SMUG1Q53HV7 270 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 LRRC10Q5BKY1 277 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 WDR25Q64LD2 544 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAAP20Q6NZ36 180 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ASCL4Q6XD76 172 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ACP7Q6ZNF0 438 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF788Q6ZQV5 615 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 LHFPL2Q6ZUX7 228 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 PRIMA1Q86XR5 153 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM71E2Q8N5Q1 922 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ZSCAN4Q8NAM6 433 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 Q8NFD4 153 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 OR4D6Q8NGJ1 314 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 C8orf46Q8TAG6 207 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 BORCS8Q96FH0 119 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 GALNT14Q96FL9 552 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 SMIM8Q96KF7 97 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 GPER1Q99527 375 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 NKX6-2Q9C056 277 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 FAM234AQ9H0X4 552 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 METTL9Q9H1A3 318 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 RIMS4Q9H426 269 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 KCNK15Q9H427 330 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 PRDM13Q9H4Q3 707 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 METTL8Q9H825 291 aaKnown RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 ELL3Q9HB65 397 aaPredicted RBP4.33□□□□□ -1.72
SHMT1-211ENST00000618902 PARP11Q9NR21 331 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 IL36GQ9NZH8 169 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 SLC7A11Q9UPY5 501 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 VSIG4Q9Y279 399 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 INSIG2Q9Y5U4 225 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 DSCAML1Q8TD84 2053 aa4.33□□□□□ -1.72
SHMT1-211ENST00000618902 BORCS7-ASMTA0A0B4J1R7 106 aa4.32□□□□□ -1.72
SHMT1-211ENST00000618902 IGHV2-70DA0A0C4DH43 119 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms