RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CD40P25942 277 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 CCKARP32238 428 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 CD80P33681 288 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 SELENOVP59797 346 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 RPS23P62266 143 aaKnown RBP11.38□□□□□ -0.59
NEK3-205ENST00000610828 RPL23AP62750 156 aaKnown RBP11.38□□□□□ -0.59
NEK3-205ENST00000610828 BTNL3Q6UXE8 466 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 GFRALQ6UXV0 394 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 STX12Q86Y82 276 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 FGFRL1Q8N441 504 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 ZBTB34Q8NCN2 500 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 C5orf30Q96GV9 206 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 RAB40CQ96S21 281 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 RFNGQ9Y644 331 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 RNASEK-C17orf49H0YIS7 233 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 ATP6V0CP27449 155 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 CFHR2P36980 270 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 RAB5CP51148 216 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 RPL30P62888 115 aaKnown RBP11.38□□□□□ -0.59
NEK3-205ENST00000610828 SPAG16Q8N0X2 631 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 PUSL1Q8N0Z8 303 aaKnown RBP11.38□□□□□ -0.59
NEK3-205ENST00000610828 ZNRF1Q8ND25 227 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
NEK3-205ENST00000610828 SYNGR2O43760 224 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 IAPPP10997 89 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 TMEM267Q0VDI3 215 aaPredicted RBP11.37□□□□□ -0.59
NEK3-205ENST00000610828 ZNF816Q0VGE8 651 aaPredicted RBP11.37□□□□□ -0.59
NEK3-205ENST00000610828 CATR1Q13166 79 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 TBR1Q16650 682 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 MRGPRGQ86SM5 289 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 FAM90A1Q86YD7 464 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 ZNF295-AS1Q8N0V1 137 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 OR2G3Q8NGZ4 309 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 TCTEX1D2Q8WW35 142 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 TOLLIPQ9H0E2 274 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 C19orf12Q9NSK7 152 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 PLCE1Q9P212 2302 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
NEK3-205ENST00000610828 ODAMA1E959 279 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 C15orf65H3BRN8 121 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 ST8SIA5O15466 376 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
NEK3-205ENST00000610828 KRASP01116 189 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 PAX5Q02548 391 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 FAM201AQ5SY85 155 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 TRAT1Q6PIZ9 186 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 PLPPR2Q96GM1 343 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 SNX22Q96L94 193 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 SEC11CQ9BY50 192 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 PSG11Q9UQ72 335 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 STRAPQ9Y3F4 350 aaKnown RBP11.36□□□□□ -0.59
NEK3-205ENST00000610828 WSB1Q9Y6I7 421 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 USF3Q68DE3 2245 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 MGST3O14880 152 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 TXNL1O43396 289 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 DVL1P1P54792 670 aaPredicted RBP11.36□□□□□ -0.59
NEK3-205ENST00000610828 EDDM3BP56851 147 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 FAM74A3Q4VXF1 159 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 FAM213BQ8TBF2 198 aa11.36□□□□□ -0.59
NEK3-205ENST00000610828 CARHSP1Q9Y2V2 147 aaKnown RBP11.36□□□□□ -0.59
NEK3-205ENST00000610828 A0A1B0GV50 99 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 C16orf97H3BN30 126 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
NEK3-205ENST00000610828 LHBP01229 141 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 CD5P06127 495 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 ADH4P08319 380 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 GZMHP20718 246 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 G6PCP35575 357 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 SNCAP37840 140 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 SULT1A1P50225 295 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 RUNX1Q01196 453 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
NEK3-205ENST00000610828 TMEM108Q6UXF1 575 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 ATP5SQ99766 215 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 PSENENQ9NZ42 101 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 GNG12Q9UBI6 72 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 MMP24Q9Y5R2 645 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 C17orf98A8MV24 154 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 K7ENP7 123 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 CLDN1O95832 211 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 HTD2P86397 168 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 TNFAIP6P98066 277 aaPredicted RBP11.35□□□□□ -0.59
NEK3-205ENST00000610828 Q3ZCU0 254 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 PRR30Q53SZ7 412 aaPredicted RBP11.35□□□□□ -0.59
NEK3-205ENST00000610828 WFDC8Q8IUA0 241 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 SNRNP40Q96DI7 357 aaKnown RBP11.35□□□□□ -0.59
NEK3-205ENST00000610828 GCM1Q9NP62 436 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
NEK3-205ENST00000610828 C9JQL5 133 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 TRIM77I1YAP6 450 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 K7N7A8 449 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 TOR1AO14656 332 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 S1PR2O95136 353 aa11.34□□□□□ -0.59
NEK3-205ENST00000610828 LINC00205P59089 165 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms