RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
CTCFL-221ENST00000608903 BEX4Q9NWD9 120 aaPredicted RBP9.51□□□□□ -0.89
CTCFL-221ENST00000608903 CALYQ9NYX4 217 aa9.51□□□□□ -0.89
CTCFL-221ENST00000608903 PDZD2O15018 2839 aa9.51□□□□□ -0.89
CTCFL-221ENST00000608903 IGKV1D-13A0A0B4J2D9 117 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 KBTBD11-OT1A0A1B0GTJ5 212 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 TUSC2O75896 110 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 IGKV1-13P0DP09 117 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 GZMHP20718 246 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 AADACP22760 399 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 CD34P28906 385 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 DLX1P56177 255 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 LOXL3P58215 753 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 MEF2CQ06413 473 aaPredicted RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 CLEC12BQ2HXU8 276 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 C11orf88Q6PI97 169 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 H1FOOQ8IZA3 346 aaPredicted RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 FAM185AQ8N0U4 392 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 OR5M8Q8NGP6 311 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 MITD1Q8WV92 249 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 MBD6Q96DN6 1003 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 RTBDNQ9BSG5 229 aaPredicted RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 ARL6Q9H0F7 186 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 LINC00574Q9H8X3 128 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 KCNIP1Q9NZI2 227 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 OR6C3Q9NZP0 311 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 CLN8Q9UBY8 286 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 LINC00312Q9Y6C7 94 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 ASH1LQ9NR48 2969 aaKnown RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 NAV2Q8IVL1 2488 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 FXYD6-FXYD2A0A087WZ82 144 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 TRGV10A0A0A0MS01 117 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 TRAV14DV4A0A0A6YYC5 116 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 FAM157AC9JC47 383 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 F2RL2O00254 374 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 TOR1AO14656 332 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 RPA2P15927 270 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 PRAMEF5Q5TYX0 476 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 ZNF565Q8N9K5 539 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 LY6G5BQ8NDX9 201 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 CASTOR1Q8WTX7 329 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 PIMREGQ9BSJ6 248 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 MS4A7Q9GZW8 240 aaPredicted RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 FXYD6Q9H0Q3 95 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 RPUSD1Q9UJJ7 312 aaKnown RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 UNC79Q9P2D8 2635 aa9.5□□□□□ -0.89
CTCFL-221ENST00000608903 PRRC2AP48634 2157 aaKnown RBP9.5□□□□□ -0.89
CTCFL-221ENST00000608903 hADV38S2A0JD32 116 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 NDUFS8O00217 210 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 TSPAN9O75954 239 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 IGHV3-7P01780 117 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 VAMP1P23763 118 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 PPP1CCP36873 323 aaKnown RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 SUPT4H1P63272 117 aaKnown RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 PAX2Q02962 417 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 PRB3Q04118 309 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 FAHD2BQ6P2I3 314 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 OR10V1Q8NGI7 309 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 C8orf46Q8TAG6 207 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 LEAP2Q969E1 77 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 FAHD2AQ96GK7 314 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 SSBP3Q9BWW4 388 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 PRR13Q9NZ81 148 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 UBE2J1Q9Y385 318 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 CSMD1Q96PZ7 3565 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 ZNF729A6NN14 1252 aaPredicted RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 CEACAM6P40199 344 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 ZNF134P52741 427 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 GNB2P62879 340 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 SRSF4Q08170 494 aaKnown RBP9.49□□□□□ -0.89
CTCFL-221ENST00000608903 PDZD9Q8IXQ8 264 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 LRRC75A-AS1Q8N1F1 130 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 GALMQ96C23 342 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 SEC22AQ96IW7 307 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 MMP26Q9NRE1 261 aa9.49□□□□□ -0.89
CTCFL-221ENST00000608903 ITPR2Q14571 2701 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 PPYP01298 95 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 CTXN2P0C2S0 81 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 ZNF728P0DKX0 622 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 FXYD4P59646 89 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 LCN2P80188 198 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 TRAT1Q6PIZ9 186 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 KCTD9Q7L273 389 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 STPG2Q8N412 459 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 OR10J5Q8NHC4 309 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 MOB3AQ96BX8 217 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 TOLLIPQ9H0E2 274 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 OR2S2Q9NQN1 319 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 TAS2R3Q9NYW6 316 aa9.48□□□□□ -0.89
CTCFL-221ENST00000608903 LOC105371242A0A075B767 164 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 TRBV23-1A0A0A0MS06 115 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 PPIAL4CA0A0B4J2A2 164 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 DBX1A6NMT0 343 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 SLC31A2O15432 143 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 SPINT2O43291 252 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
CTCFL-221ENST00000608903 IGLV2-14P01704 120 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 PPIAL4GP0DN37 164 aa9.47□□□□□ -0.89
CTCFL-221ENST00000608903 HLA-GP17693 338 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms