RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 NBEAL2Q6ZNJ1 2754 aa10.59□□□□□ -0.71
TRIM28-211ENST00000597968 SAA2-SAA4A0A096LPE2 208 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 CDK1P06493 297 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 SAA2P0DJI9 122 aaPredicted RBP10.58□□□□□ -0.72
TRIM28-211ENST00000597968 VSIG8P0DPA2 414 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 CD40LGP29965 261 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 ACSM3Q53FZ2 586 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 SVOPQ8N4V2 548 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 FAM46BQ96A09 425 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 VCXQ9H320 206 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 PARP11Q9NR21 331 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 SLC23A1Q9UHI7 598 aa10.58□□□□□ -0.72
TRIM28-211ENST00000597968 RRHO14718 337 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 OVOL1O14753 267 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 SLC22A1O15245 554 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 SRMP19623 302 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 HTR2CP28335 458 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 GNMTQ14749 295 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 AKIRIN2Q53H80 203 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 NKAPLQ5M9Q1 402 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 OR6M1Q8NGM8 313 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 PRR25Q96S07 402 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 SULT4A1Q9BR01 284 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 URM1Q9BTM9 101 aaKnown RBP10.57□□□□□ -0.72
TRIM28-211ENST00000597968 TMED9Q9BVK6 235 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 KLK15Q9H2R5 256 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 SLA2Q9H6Q3 261 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 HSF4Q9ULV5 492 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 FOXA2Q9Y261 457 aaPredicted RBP10.57□□□□□ -0.72
TRIM28-211ENST00000597968 WSB1Q9Y6I7 421 aa10.57□□□□□ -0.72
TRIM28-211ENST00000597968 TMEM14DPA8MWL7 114 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 LINC01619G3V211 115 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 G3V318 75 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 SPDEFO95238 335 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 ZBTB25P24278 435 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 BLVRBP30043 206 aaPredicted RBP10.56□□□□□ -0.72
TRIM28-211ENST00000597968 AQP4P55087 323 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 GABPB1Q06547 395 aaPredicted RBP10.56□□□□□ -0.72
TRIM28-211ENST00000597968 HSD17B12Q53GQ0 312 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 LRRTM1Q86UE6 522 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 OR6Q1Q8NGQ2 317 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 PTX4Q96A99 478 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 AGMATQ9BSE5 352 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 FAAP24Q9BTP7 215 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 TOLLIPQ9H0E2 274 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 PLEKHJ1Q9NW61 149 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 WASHC3Q9Y3C0 194 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 NUBP2Q9Y5Y2 271 aa10.56□□□□□ -0.72
TRIM28-211ENST00000597968 GSTP1P09211 210 aaKnown RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 UCHL1P09936 223 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 OR8U9P0C7N5 309 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 PSMA1P25786 263 aaKnown RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 OR3A3P47888 321 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 CX3CL1P78423 397 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 QRFPP83859 136 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 PLGLAQ15195 96 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 SPHARQ15513 63 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 TRAM1Q15629 374 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 RBM48Q5RL73 367 aaKnown RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 ASPHD1Q5U4P2 390 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 C6orf201Q7Z4U5 140 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 CEACAM19Q7Z692 300 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 FAM89BQ8N5H3 189 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 IL1F10Q8WWZ1 152 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 TMEM203Q969S6 136 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 FLYWCH2Q96CP2 140 aaKnown RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 RITA1Q96K30 269 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 KCNK15Q9H427 330 aa10.55□□□□□ -0.72
TRIM28-211ENST00000597968 CHMP1AQ9HD42 196 aaPredicted RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 LSM2Q9Y333 95 aaKnown RBP10.55□□□□□ -0.72
TRIM28-211ENST00000597968 A0A1W2PN81 502 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 H0YJW9 148 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 H3BUA1 57 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 TFAP2AP05549 437 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 CNTFRP26992 372 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 CHRNA7P36544 502 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 GNB1P62873 340 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 UNC119Q13432 240 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 MED22Q15528 200 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 MOGAT2Q3SYC2 334 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 FAM131AQ6UXB0 335 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 DCUN1D4Q92564 292 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 TMEM68Q96MH6 324 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 TSNAXQ99598 290 aaKnown RBP10.54□□□□□ -0.72
TRIM28-211ENST00000597968 CENPOQ9BU64 300 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 ISYNA1Q9NPH2 558 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
TRIM28-211ENST00000597968 ST8SIA5O15466 376 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms