RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CT45A1Q5HYN5 189 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 C9orf152Q5JTZ5 239 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 DRAM1Q8N682 238 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 OR2AK2Q8NG84 335 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 CT45A3Q8NHU0 189 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 CYYR1Q96J86 154 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 B9D2Q9BPU9 175 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 HDHD3Q9BSH5 251 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 ABHD14AQ9BUJ0 271 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 MRPS26Q9BYN8 205 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 DNAH9Q9NYC9 4486 aa13.87□□□□□ -0.19
SHKBP1-203ENST00000594298 TRDCB7Z8K6 153 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 MFNGO00587 321 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 ZBTB25P24278 435 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 THBS3P49746 956 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 ZNF134P52741 427 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 ZNF137PP52743 207 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 RPL23AP62750 156 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 KIR2DS1Q14954 304 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 CDNFQ49AH0 187 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 FAM53AQ6NSI3 398 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 TGIF2LXQ8IUE1 241 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 LGALS14Q8TCE9 139 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 MCRIP2Q9BUT9 160 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 FUNDC2Q9BWH2 189 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 KCNK7Q9Y2U2 307 aa13.86□□□□□ -0.19
SHKBP1-203ENST00000594298 IGHV1-3A0A0C4DH29 117 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 A0A1W2PPI3 338 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 SLC31A2O15432 143 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 HSPA12AO43301 675 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 SNRNP70P08621 437 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 PITPNAQ00169 270 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 CD69Q07108 199 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 DCTN2Q13561 401 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 DIAPH2-AS1Q14236 149 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 HES1Q14469 280 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 GNMTQ14749 295 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 ZNF329Q86UD4 541 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 OR4A4PQ8NGN8 299 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 OR56B4Q8NH76 319 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 CHPT1Q8WUD6 406 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 RTN4IP1Q8WWV3 396 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 EDARADDQ8WWZ3 215 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 ST6GALNAC6Q969X2 333 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 ZFP57Q9NU63 452 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 RYR3Q15413 4870 aa13.85□□□□□ -0.19
SHKBP1-203ENST00000594298 A0A0A6YYH2 397 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 A6NJ64 397 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 ITGB1BP1O14713 200 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 FGF16O43320 207 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 LANCL1O43813 399 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 GSTP1P09211 210 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 CD1BP29016 333 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 RPS19P39019 145 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 CEACAM6P40199 344 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 REG1BP48304 166 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 SERPINB10P48595 397 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 SRSF7Q16629 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 C5orf24Q7Z6I8 188 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 WWC2-AS2Q96NR7 200 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 DIABLOQ9NR28 239 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 PIPOXQ9P0Z9 390 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 SLC23A1Q9UHI7 598 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
SHKBP1-203ENST00000594298 FABP7O15540 132 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 FCGR3AP08637 254 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 SCTP09683 121 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 TMEM11P17152 192 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 DTYMKP23919 212 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 MYCNOSP40205 109 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 PNLIPRP3Q17RR3 467 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 HACD4Q5VWC8 232 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 COMMD1Q8N668 190 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 OR2T10Q8NGZ9 312 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 P2RX4Q99571 388 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 ZMAT5Q9UDW3 170 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 NBEAL2Q6ZNJ1 2754 aa13.83□□□□□ -0.2
SHKBP1-203ENST00000594298 DIRAS3O95661 229 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 IGKV1D-33P01593 117 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 IGKV1-33P01594 117 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 TGFBR1P36897 503 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 EBI3Q14213 229 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 GPR141Q7Z602 305 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 ANKRD13BQ86YJ7 626 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 IZUMO1Q8IYV9 350 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 OR5H6Q8NGV6 325 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 S1PR3Q99500 378 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 DCSTAMPQ9H295 470 aa13.82□□□□□ -0.2
SHKBP1-203ENST00000594298 RAB29O14966 203 aa13.81□□□□□ -0.2
SHKBP1-203ENST00000594298 IGHG2P01859 326 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms