RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 YPEL1O60688 119 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 LY86O95711 162 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 OR8U8P0C7N1 319 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
MBD3-206ENST00000589901 RAB9AP51151 201 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 RUNX1Q01196 453 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 ZNF616Q08AN1 781 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 TMEM203Q969S6 136 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 GALMQ96C23 342 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 NEDD4LQ96PU5 975 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 YPEL2Q96QA6 119 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 MGLLQ99685 303 aa12.64□□□□□ -0.39
MBD3-206ENST00000589901 ALX4Q9H161 411 aaPredicted RBP12.64□□□□□ -0.39
MBD3-206ENST00000589901 LSM2Q9Y333 95 aaKnown RBP12.64□□□□□ -0.39
MBD3-206ENST00000589901 HUWE1Q7Z6Z7 4374 aaKnown RBP12.64□□□□□ -0.39
MBD3-206ENST00000589901 CHATP28329 748 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 PSMD7P51665 324 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 NDPQ00604 133 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 IRF3Q14653 427 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 HMGN3Q15651 99 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 ZNF367Q7RTV3 350 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 MINDY2Q8NBR6 621 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 NPBQ8NG41 125 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 DCUN1D4Q92564 292 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 FAAP24Q9BTP7 215 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 IFI27L2Q9H2X8 130 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 PLGRKTQ9HBL7 147 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 ACOT13Q9NPJ3 140 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
MBD3-206ENST00000589901 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 SOX15O60248 233 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
MBD3-206ENST00000589901 RGS11O94810 467 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 NDUFA3O95167 84 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 CPEP16870 476 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 HTR2CP28335 458 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 INSL3P51460 131 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 TPBGQ13641 420 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 TBCEQ15813 527 aaPredicted RBP12.62□□□□□ -0.39
MBD3-206ENST00000589901 ECSCRQ19T08 205 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 LY6G6FQ5SQ64 297 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 FAM131AQ6UXB0 335 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 C6orf201Q7Z4U5 140 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 OR6M1Q8NGM8 313 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 KCNG3Q8TAE7 436 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 CASTOR1Q8WTX7 329 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 IL1F10Q8WWZ1 152 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 TMEM59Q9BXS4 323 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
MBD3-206ENST00000589901 OVOL1O14753 267 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 BPNT1O95861 308 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 UCHL1P09936 223 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 RPS27AP62979 156 aaKnown RBP12.61□□□□□ -0.39
MBD3-206ENST00000589901 RPL39P5Q59GN2 51 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 C19orf54Q5BKX5 351 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 LRRTM1Q86UE6 522 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
MBD3-206ENST00000589901 NICN1Q9BSH3 213 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 URM1Q9BTM9 101 aaKnown RBP12.61□□□□□ -0.39
MBD3-206ENST00000589901 PARP12Q9H0J9 701 aaKnown RBP12.61□□□□□ -0.39
MBD3-206ENST00000589901 FBXL15Q9H469 300 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 ABRACLQ9P1F3 81 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 LRRC42Q9Y546 428 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 SMAD5-AS1Q9Y6J3 95 aa12.61□□□□□ -0.39
MBD3-206ENST00000589901 A0A1W2PN81 502 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 FCN1O00602 326 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 PDCD5O14737 125 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 CT45A6P0DMU7 189 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 CT45A5P0DMU8 189 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 CT45A7P0DMV0 189 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 MYL9P24844 172 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
MBD3-206ENST00000589901 CHRNA7P36544 502 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 SLURP1P55000 103 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 GABARAPL2P60520 117 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 CX3CL1P78423 397 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 GLDNQ6ZMI3 551 aaPredicted RBP12.6□□□□□ -0.39
MBD3-206ENST00000589901 ZNF429Q86V71 674 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 STEAP1Q9UHE8 339 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 A3GALT2U3KPV4 340 aa12.6□□□□□ -0.39
MBD3-206ENST00000589901 RRHO14718 337 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 SAP30O75446 220 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 NAPSAO96009 420 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
MBD3-206ENST00000589901 SNRPBP14678 240 aaKnown RBP12.59□□□□□ -0.39
MBD3-206ENST00000589901 ARSBP15848 533 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 MAP2K4P45985 399 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 RPS25P62851 125 aaKnown RBP12.59□□□□□ -0.39
MBD3-206ENST00000589901 UNC119Q13432 240 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 C1orf100Q5SVJ3 147 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 ZNF660Q6AZW8 331 aaPredicted RBP12.59□□□□□ -0.39
MBD3-206ENST00000589901 FAM71F2Q6NXP2 309 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
MBD3-206ENST00000589901 SETD6Q8TBK2 473 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms