RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 FOXH1O75593 365 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 CLDN1O95832 211 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 SCGB1D2O95969 90 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 APOA2P02652 100 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 HOXB5P09067 269 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L2P0CJ85 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L3P0CJ86 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L4P0CJ87 422 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L5P0CJ88 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L6P0CJ89 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L7P0CJ90 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 PPIAL4GP0DN37 164 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 IGKV1-13P0DP09 117 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 OMGP23515 440 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 F2RP25116 425 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 ARHGDIBP52566 201 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 PRRX1P54821 245 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 S100A10P60903 97 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 GNMTQ14749 295 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 RTL8BQ17RB0 113 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 IAH1Q2TAA2 248 aaPredicted RBP5.12□□□□□ -1.59
LIG3-206ENST00000586058 MORN2Q502X0 79 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 LY6G6FQ5SQ64 297 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 PRAMEF5Q5TYX0 476 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4L9Q6RFH8 374 aaPredicted RBP5.12□□□□□ -1.59
LIG3-206ENST00000586058 LYPD2Q6UXB3 125 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 BTNL3Q6UXE8 466 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 Q6ZPA2 131 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 LYG1Q8N1E2 194 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 OR13D1Q8NGV5 346 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 OR9G1Q8NH87 305 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 ZNF596Q8TC21 504 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 RBPMSQ93062 196 aaKnown RBP5.12□□□□□ -1.59
LIG3-206ENST00000586058 MRGPRFQ96AM1 343 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 ST6GAL2Q96JF0 529 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 FYTTD1Q96QD9 318 aaKnown RBP5.12□□□□□ -1.59
LIG3-206ENST00000586058 CLCC1Q96S66 551 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 AIFM2Q9BRQ8 373 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 NMES1Q9C002 83 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 TOLLIPQ9H0E2 274 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 TMEM222Q9H0R3 208 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 ZC4H2Q9NQZ6 224 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 C19orf12Q9NSK7 152 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 FAM212BQ9NTI7 297 aaPredicted RBP5.12□□□□□ -1.59
LIG3-206ENST00000586058 CTSZQ9UBR2 303 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 DUX4Q9UBX2 424 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 CACFD1Q9UGQ2 172 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 SESN1Q9Y6P5 492 aa5.12□□□□□ -1.59
LIG3-206ENST00000586058 LOC105371242A0A075B767 164 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 MEX3AA1L020 520 aaKnown RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 L7N2F9 121 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 M0R1W7 72 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 M0R1X1 148 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 RBMXL2O75526 392 aaKnown RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 PGLYRP1O75594 196 aaPredicted RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 LY6HO94772 140 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 CDS2O95674 445 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 WNT2P09544 360 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 RRASP10301 218 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 HLA-GP17693 338 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 CXCL3P19876 107 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 VDAC1P21796 283 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 UCP1P25874 307 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 CEACAM3P40198 252 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 THBS3P49746 956 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 VAMP2P63027 116 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 SUPT4H1P63272 117 aaKnown RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 ZNF273Q14593 569 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 TMEM187Q14656 261 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 LRRC37A5PQ49AS3 106 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 WDR25Q64LD2 544 aaPredicted RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 FAM71F2Q6NXP2 309 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 FAM219AQ8IW50 185 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 DRAM1Q8N682 238 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 KIR3DL3Q8N743 410 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 ZNF525Q8N782 197 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 SLC35G3Q8N808 338 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 LRTM2Q8N967 370 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 INO80EQ8NBZ0 244 aaPredicted RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 OR4S2Q8NH73 311 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 OR1S1Q8NH92 325 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 C8orf46Q8TAG6 207 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 TMEM186Q96B77 213 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 PERPQ96FX8 193 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 CYYR1Q96J86 154 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 C2orf50Q96LR7 162 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 TP53RKQ96S44 253 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 CLEC7AQ9BXN2 247 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 TMEM133Q9H2Q1 129 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 LIME1Q9H400 295 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 GSKIPQ9P0R6 139 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 RPUSD1Q9UJJ7 312 aaKnown RBP5.11□□□□□ -1.59
LIG3-206ENST00000586058 RNF150Q9ULK6 438 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 PKDREJQ9NTG1 2253 aa5.11□□□□□ -1.59
LIG3-206ENST00000586058 SAA2-SAA4A0A096LPE2 208 aa5.1□□□□□ -1.59
LIG3-206ENST00000586058 A0A1W2PPR1 153 aa5.1□□□□□ -1.59
LIG3-206ENST00000586058 DBX1A6NMT0 343 aa5.1□□□□□ -1.59
LIG3-206ENST00000586058 OVOL3O00110 214 aa5.1□□□□□ -1.59
LIG3-206ENST00000586058 ADAP1O75689 374 aa5.1□□□□□ -1.59
LIG3-206ENST00000586058 OR2A4O95047 310 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms