RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 LANCL1O43813 399 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 SLC22A5O76082 557 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 GAPDHP04406 335 aaKnown RBP13.5□□□□□ -0.25
CLN6-208ENST00000567060 PTHLHP12272 177 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 BRS3P32247 399 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 RPL15P61313 204 aaKnown RBP13.5□□□□□ -0.25
CLN6-208ENST00000567060 GNMTQ14749 295 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 CDK10Q15131 360 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 LRRC75BQ2VPJ9 315 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 IGSF11Q5DX21 431 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 LIAT1Q6ZQX7 453 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 LHFPL4Q7Z7J7 247 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 GVQW1Q8N7I0 195 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 SIGLECL1Q8N7X8 197 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 MAFIPQ8WZ33 124 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 SNAPC3Q92966 411 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 LEAP2Q969E1 77 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 TOMM40LQ969M1 308 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 ZNF48Q96MX3 618 aaPredicted RBP13.5□□□□□ -0.25
CLN6-208ENST00000567060 AGMATQ9BSE5 352 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 PTTG2Q9NZH5 202 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 OR1A1Q9P1Q5 309 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 IER3P46695 156 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 OR3A3P47888 321 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 ZNF134P52741 427 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 BAMBIQ13145 260 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 SSX2Q16385 188 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 PLA1AQ53H76 456 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 FAM131AQ6UXB0 335 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 DEDD2Q8WXF8 326 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 S1PR3Q99500 378 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 IFI27L2Q9H2X8 130 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 ABCB10Q9NRK6 738 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 RBMX2Q9Y388 322 aaKnown RBP13.49□□□□□ -0.25
CLN6-208ENST00000567060 OR2W1Q9Y3N9 320 aa13.49□□□□□ -0.25
CLN6-208ENST00000567060 PRKDCP78527 4128 aaKnown RBP13.49□□□□□ -0.25
CLN6-208ENST00000567060 TRIM77I1YAP6 450 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 HSD17B6O14756 317 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 TUSC2O75896 110 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 ZNF45Q02386 682 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 MSMO1Q15800 293 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 UTF1Q5T230 341 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 OVCH2Q7RTZ1 564 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 THNSL2Q86YJ6 484 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 LYG1Q8N1E2 194 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 OR5H2Q8NGV7 314 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 GIMAP1Q8WWP7 306 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 GCDHQ92947 438 aaPredicted RBP13.48□□□□□ -0.25
CLN6-208ENST00000567060 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 C11orf54Q9H0W9 315 aaPredicted RBP13.48□□□□□ -0.25
CLN6-208ENST00000567060 ZNF221Q9UK13 617 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 PITPNC1Q9UKF7 332 aa13.48□□□□□ -0.25
CLN6-208ENST00000567060 ZNF736B4DX44 427 aaPredicted RBP13.47□□□□□ -0.25
CLN6-208ENST00000567060 SLC31A2O15432 143 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 IGHV3-7P01780 117 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 CSF1P09603 554 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 TAS2R19P59542 299 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 DYRK1AQ13627 763 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 HABP2Q14520 560 aaPredicted RBP13.47□□□□□ -0.25
CLN6-208ENST00000567060 VAX1Q5SQQ9 334 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 DHRS11Q6UWP2 260 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 ZNF833PQ6ZTB9 187 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 TGIF2LXQ8IUE1 241 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 TMEM229BQ8NBD8 167 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 RTN4IP1Q8WWV3 396 aaPredicted RBP13.47□□□□□ -0.25
CLN6-208ENST00000567060 SSX3Q99909 188 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 RAB18Q9NP72 206 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 HILPDAQ9Y5L2 63 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 V9GYH0 126 aa13.47□□□□□ -0.25
CLN6-208ENST00000567060 A0A1W2PPE3 182 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 MEIS3P1A6NDR6 274 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 RNASE1P07998 156 aaKnown RBP13.46□□□□□ -0.25
CLN6-208ENST00000567060 LUMP51884 338 aaPredicted RBP13.46□□□□□ -0.25
CLN6-208ENST00000567060 C5orf24Q7Z6I8 188 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 LYSMD2Q8IV50 215 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 ODF3L1Q8IXM7 274 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 GDPD1Q8N9F7 314 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 C17orf50Q8WW18 174 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 KLK11Q9UBX7 282 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 VPREB3Q9UKI3 123 aa13.46□□□□□ -0.25
CLN6-208ENST00000567060 RBM7Q9Y580 266 aaKnown RBP13.46□□□□□ -0.25
CLN6-208ENST00000567060 SAA2-SAA4A0A096LPE2 208 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 IGHV1-3A0A0C4DH29 117 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 MDFIC2A0A1B0GVS7 189 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 A0A1W2PPI3 338 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 HOXA3O43365 443 aaPredicted RBP13.45□□□□□ -0.26
CLN6-208ENST00000567060 CD74P04233 296 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 SAA2P0DJI9 122 aaPredicted RBP13.45□□□□□ -0.26
CLN6-208ENST00000567060 GPR12P47775 334 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 AP3S2P59780 193 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 DGCR2P98153 550 aa13.45□□□□□ -0.26
CLN6-208ENST00000567060 TAGLNQ01995 201 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms