RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 A0A087WZ39 114 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 SAA2-SAA4A0A096LPE2 208 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 BORCS7-ASMTA0A0B4J1R7 106 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 TRAV39A0A0B4J263 110 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 RBFOX3A6NFN3 312 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 CDRT1O95170 752 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 HBZP02008 142 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 ALPLP05186 524 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 CSRP1P21291 193 aaKnown RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 FOLR3P41439 243 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 POLR2HP52434 150 aaKnown RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 JOSD1Q15040 202 aaPredicted RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 GUCA2BQ16661 112 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 LRRC10Q5BKY1 277 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 MESTQ5EB52 335 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 C1orf189Q5VU69 101 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 SP5Q6BEB4 398 aaPredicted RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 SUMF1Q8NBK3 374 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 OR2T6Q8NHC8 308 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 LMO3Q8TAP4 145 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 RXFP4Q8TDU9 374 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 BLNKQ8WV28 456 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 BORCS7Q96B45 105 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 BMFQ96LC9 184 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 ATOH8Q96SQ7 321 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 HSD17B10Q99714 261 aaKnown RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 ANAPC13Q9BS18 74 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 OR2H1Q9GZK4 316 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 COMMD9Q9P000 198 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 MARCOQ9UEW3 520 aaPredicted RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 NUFIP1Q9UHK0 495 aaKnown RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 VAX2Q9UIW0 290 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 PHIPQ8WWQ0 1821 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 SNAPC5O75971 98 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 SLC2A10O95528 541 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 DBIP07108 87 aaKnown RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 MYL9P24844 172 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 ATP4BP51164 291 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 RHOGP84095 191 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 CD226Q15762 336 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 C19orf48Q6RUI8 117 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 GPR26Q8NDV2 337 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 THAP6Q8TBB0 222 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 RXFP2Q8WXD0 754 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 MYEOVQ96EZ4 313 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 PBDC1Q9BVG4 233 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 ZNF331Q9NQX6 463 aaPredicted RBP3.89□□□□□ -1.79
SMG1-207ENST00000563235 DEPPQ9NTK1 212 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 RBM22Q9NW64 420 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMG1-207ENST00000563235 RNF7Q9UBF6 113 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 CHST2Q9Y4C5 530 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 V9GYH0 126 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 CITO14578 2027 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 ARID2Q68CP9 1835 aa3.89□□□□□ -1.79
SMG1-207ENST00000563235 IGKV1D-8A0A087WSZ0 117 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 IQCMA0A1B0GVH7 501 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 UPK1AO00322 258 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 HCRTR1O43613 425 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 EPPINO95925 133 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 APOA2P02652 100 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 FGF1P05230 155 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 KLK2P20151 261 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 EVI2AP22794 236 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 CD38P28907 300 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 S100A2P29034 98 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 MIPP30301 263 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 G6PCP35575 357 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 CXCL12P48061 93 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 RIGQ13278 110 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 KIAA0040Q15053 153 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 SSX1Q16384 188 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 CLEC12BQ2HXU8 276 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 GLYATL3Q5SZD4 288 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 XP32Q5T750 250 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 APOOLQ6UXV4 268 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 Q6ZVQ6 151 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 LINC00471Q8N535 108 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 GPR146Q96CH1 333 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 FAM19A4Q96LR4 140 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 MGLLQ99685 303 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 PLAC1Q9HBJ0 212 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 FAM49BQ9NUQ9 324 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 ORC6Q9Y5N6 252 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 ALPK3Q96L96 1907 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 PIEZO1Q92508 2521 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 DHRS12A0PJE2 317 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 C8orf87E5RJ46 101 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 H7C1C5 153 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 SLC17A2O00624 439 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 ZNF354AO60765 605 aaPredicted RBP3.88□□□□□ -1.79
SMG1-207ENST00000563235 PGLYRP1O75594 196 aaPredicted RBP3.88□□□□□ -1.79
SMG1-207ENST00000563235 DHRS3O75911 302 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 UCHL1P09936 223 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 LINC00694P0DN24 101 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 AGTR1P30556 359 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 LCN6P62502 163 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 SLC38A11Q08AI6 406 aa3.88□□□□□ -1.79
SMG1-207ENST00000563235 ZNF154Q13106 437 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms