RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 CDX1P47902 265 aaPredicted RBP10.56□□□□□ -0.72
USB1-205ENST00000561743 TMEM50BP56557 158 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 TBCEQ15813 527 aaPredicted RBP10.56□□□□□ -0.72
USB1-205ENST00000561743 RPL39P5Q59GN2 51 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 IZUMO2Q6UXV1 221 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 OR8U1Q8NH10 309 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 MCRIP2Q9BUT9 160 aaKnown RBP10.56□□□□□ -0.72
USB1-205ENST00000561743 VCX3BQ9H321 246 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 PIPOXQ9P0Z9 390 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 OR1A1Q9P1Q5 309 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 SLC23A1Q9UHI7 598 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 HSF4Q9ULV5 492 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 IGHV7-81A0A0B4J1V7 117 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 G3V318 75 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 ITGB1BP1O14713 200 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 RAB29O14966 203 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 ATP6V0E1O15342 81 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 NDUFA3O95167 84 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 PPIFP30405 207 aaKnown RBP10.55□□□□□ -0.72
USB1-205ENST00000561743 HSPA13P48723 471 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 VEGFCP49767 419 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 HLA-DRB3P79483 266 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 KIR2DS1Q14954 304 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 SSX1Q16384 188 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 C5orf64Q2M2E5 130 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 FAM131AQ6UXB0 335 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 NPBQ8NG41 125 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 MYOZ3Q8TDC0 251 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 DPF1Q92782 380 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 FAM3DQ96BQ1 224 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 ABHD14BQ96IU4 210 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 PECRQ9BY49 303 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 OR51J1Q9H342 316 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 ACOT13Q9NPJ3 140 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 C12orf4Q9NQ89 552 aa10.55□□□□□ -0.72
USB1-205ENST00000561743 LDLRAD4O15165 306 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 SCTP09683 121 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 CT45A6P0DMU7 189 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 CT45A5P0DMU8 189 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 CT45A7P0DMV0 189 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 OR5H8P0DN80 308 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 ZBTB25P24278 435 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 RAB25P57735 213 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 PLA2G7Q13093 441 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 PLAC9Q5JTB6 97 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 GLDNQ6ZMI3 551 aaPredicted RBP10.54□□□□□ -0.72
USB1-205ENST00000561743 ZNF367Q7RTV3 350 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 C4orf3Q8WVX3 66 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 CHCHD6Q9BRQ6 235 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 Q9N2K0 584 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 PARP11Q9NR21 331 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 MGAT4AQ9UM21 535 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 WSB1Q9Y6I7 421 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 V9GY05 133 aa10.54□□□□□ -0.72
USB1-205ENST00000561743 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 TMEM272A0A1B0GTI8 110 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 SHISA3A0PJX4 238 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 H0YJW9 148 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 IGLV1-40P01703 118 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 CEACAM6P40199 344 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 NDPQ00604 133 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 FHL3Q13643 280 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 KIAA0141Q14154 515 aaPredicted RBP10.53□□□□□ -0.72
USB1-205ENST00000561743 HES5Q5TA89 166 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 LIN54Q6MZP7 749 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 OR56B1Q8NGI3 324 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 EDARADDQ8WWZ3 215 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 CMSS1Q9BQ75 279 aaKnown RBP10.53□□□□□ -0.72
USB1-205ENST00000561743 C11orf54Q9H0W9 315 aaPredicted RBP10.53□□□□□ -0.72
USB1-205ENST00000561743 KLK15Q9H2R5 256 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 GHITMQ9H3K2 345 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 NDUFB11Q9NX14 153 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 KIAA1456Q9P272 454 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 BLOC1S6Q9UL45 172 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 FBXO7Q9Y3I1 522 aa10.53□□□□□ -0.72
USB1-205ENST00000561743 TRAV41A0A0B4J266 112 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 RRHO14718 337 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 HSPA12AO43301 675 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 DENRO43583 198 aaKnown RBP10.52□□□□□ -0.73
USB1-205ENST00000561743 PROP1O75360 226 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 PSMD7P51665 324 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 LUMP51884 338 aaPredicted RBP10.52□□□□□ -0.73
USB1-205ENST00000561743 OR10A3P58181 314 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 DEFB121Q5J5C9 76 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 CD200R1LQ6Q8B3 271 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 OR5M8Q8NGP6 311 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 PTX4Q96A99 478 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 UBE2E2Q96LR5 201 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 FBXL15Q9H469 300 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 GNB4Q9HAV0 340 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 KCNK7Q9Y2U2 307 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 WASHC3Q9Y3C0 194 aa10.52□□□□□ -0.73
USB1-205ENST00000561743 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms