RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 C11orf94C9JXX5 98 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 ZNF708P17019 499 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 SSBP3Q9BWW4 388 aaPredicted RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 SLIRPQ9GZT3 109 aaKnown RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 GSX1Q9H4S2 264 aaPredicted RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 IQCF6A8MYZ5 107 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 KLF7O75840 302 aaPredicted RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 CD1BP29016 333 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 DYNLT3P51808 116 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 ZNF345Q14585 488 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 H1FOOQ8IZA3 346 aaPredicted RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 TMPRSS13Q9BYE2 586 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 MRPS18BQ9Y676 258 aaKnown RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 RBFOX3A6NFN3 312 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 FCN1O00602 326 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 SOCS1O15524 211 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 ICMTO60725 284 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 C8orf82Q6P1X6 216 aaPredicted RBP10.31□□□□□ -0.76
NEK9-210ENST00000557026 TNFRSF14Q92956 283 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 PRSS22Q9GZN4 317 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 RNF167Q9H6Y7 350 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 IGLV1-36A0A0B4J1U3 117 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 HAX1O00165 279 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 RD3LP0DJH9 198 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 PDCD1Q15116 288 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 PLAC9Q5JTB6 97 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 TMEM52Q8NDY8 209 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 TUBA4BQ9H853 241 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 FOXJ2Q9P0K8 574 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 PRSS50Q9UI38 385 aa10.31□□□□□ -0.76
NEK9-210ENST00000557026 TCAPO15273 167 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 TIAL1Q01085 375 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEK9-210ENST00000557026 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 DUX5Q96PT3 197 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 MYO5AQ9Y4I1 1855 aaKnown RBP10.3□□□□□ -0.76
NEK9-210ENST00000557026 HRKO00198 91 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 LIMS1P48059 325 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 IRF3Q14653 427 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 WDR25Q64LD2 544 aaPredicted RBP10.3□□□□□ -0.76
NEK9-210ENST00000557026 FAAP20Q6NZ36 180 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 RHOVQ96L33 236 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 DOK5Q9P104 306 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 IGHV3OR15-7A0A075B7D8 119 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 OOSP1A8MZH6 123 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEK9-210ENST00000557026 CADM3Q8N126 398 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 MEGF10Q96KG7 1140 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 GGACTQ9BVM4 153 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 TMEM50BP56557 158 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 CD81P60033 236 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 CDCP2Q5VXM1 449 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 SLC16A13Q7RTY0 426 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 ZIC4Q8N9L1 334 aa10.3□□□□□ -0.76
NEK9-210ENST00000557026 A0A0B4J293 547 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 KBTBD11O94819 623 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 MELTFP08582 738 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 ACSF3Q4G176 576 aaPredicted RBP10.29□□□□□ -0.76
NEK9-210ENST00000557026 MRPL14Q6P1L8 145 aaKnown RBP10.29□□□□□ -0.76
NEK9-210ENST00000557026 TMEM105Q8N8V8 129 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 COL11A2P13942 1736 aaPredicted RBP10.29□□□□□ -0.76
NEK9-210ENST00000557026 PRSS1P07477 247 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 SFTA3P0C7M3 94 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 ZAR1Q86SH2 424 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 IMMP1LQ96LU5 166 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 VAMP8Q9BV40 100 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 IGKV3D-11A0A0A0MRZ8 115 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 TMEM189A5PLL7 270 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 IGKV1D-16P01601 117 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 G6PCP35575 357 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 SULT1A2P50226 295 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 MRGPRFQ96AM1 343 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 PRSS27Q9BQR3 290 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 MAP1LC3CQ9BXW4 147 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 MRPL37Q9BZE1 423 aaKnown RBP10.29□□□□□ -0.76
NEK9-210ENST00000557026 YAE1D1Q9NRH1 226 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 IGKV1-8A0A0C4DH67 115 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 RNASEKQ6P5S7 137 aaKnown RBP10.29□□□□□ -0.76
NEK9-210ENST00000557026 GTF2H5Q6ZYL4 71 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 C11orf42Q8N5U0 333 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
NEK9-210ENST00000557026 AUP1Q9Y679 476 aa10.29□□□□□ -0.76
NEK9-210ENST00000557026 TIMP3P35625 211 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEK9-210ENST00000557026 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 ZP3P21754 424 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 LTBRP36941 435 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 ZFP36L1Q07352 338 aaKnown RBP10.28□□□□□ -0.76
NEK9-210ENST00000557026 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 ZNF383Q8NA42 475 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 TMEM74BQ9NUR3 256 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 HILPDAQ9Y5L2 63 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 IGLV3-32A0A0A0MS00 114 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 DLK1P80370 383 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 ORAI1Q96D31 301 aa10.28□□□□□ -0.76
NEK9-210ENST00000557026 ADAT3Q96EY9 351 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms