RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ARL6IP1Q15041 203 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 CDNFQ49AH0 187 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 RPL39P5Q59GN2 51 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 OR4A4PQ8NGN8 299 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-204ENST00000547517 NUDCD2Q8WVJ2 157 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 EDARADDQ8WWZ3 215 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 NABP2Q9BQ15 211 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 PIPOXQ9P0Z9 390 aa9.39□□□□□ -0.91
RAB5C-204ENST00000547517 CMYA5Q8N3K9 4069 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 ITGB1BP1O14713 200 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 GSTT2BP0CG30 244 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 GNG2P59768 71 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 NSUN5P1Q3KNT7 163 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 IGSF11Q5DX21 431 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 HACD4Q5VWC8 232 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 FAM71F2Q6NXP2 309 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-204ENST00000547517 Q8N9W7 124 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 OR5AU1Q8NGC0 362 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 PHF21AQ96BD5 680 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 S1PR3Q99500 378 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 CITED2Q99967 270 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-204ENST00000547517 CABLES2Q9BTV7 478 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 FUNDC2Q9BWH2 189 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 C11orf54Q9H0W9 315 aaPredicted RBP9.38□□□□□ -0.91
RAB5C-204ENST00000547517 MMP27Q9H306 513 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
RAB5C-204ENST00000547517 RDH8Q9NYR8 311 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 SCOCQ9UIL1 159 aa9.38□□□□□ -0.91
RAB5C-204ENST00000547517 GSTP1P09211 210 aaKnown RBP9.37□□□□□ -0.91
RAB5C-204ENST00000547517 DTYMKP23919 212 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 RPS19P39019 145 aaKnown RBP9.37□□□□□ -0.91
RAB5C-204ENST00000547517 GPR12P47775 334 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 SERPINB10P48595 397 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 NCS1P62166 190 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 MMDQ15546 238 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 FAM131AQ6UXB0 335 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 GLDNQ6ZMI3 551 aaPredicted RBP9.37□□□□□ -0.91
RAB5C-204ENST00000547517 SLC35E3Q7Z769 313 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 OR13F1Q8NGS4 319 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 OR10J5Q8NHC4 309 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 FAM110DQ8TAY7 271 aaPredicted RBP9.37□□□□□ -0.91
RAB5C-204ENST00000547517 NOL4LQ96MY1 436 aaPredicted RBP9.37□□□□□ -0.91
RAB5C-204ENST00000547517 ZNF251Q9BRH9 671 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 GINS4Q9BRT9 223 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 AGMATQ9BSE5 352 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
RAB5C-204ENST00000547517 ZNF221Q9UK13 617 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 RNF150Q9ULK6 438 aa9.37□□□□□ -0.91
RAB5C-204ENST00000547517 TRAV18A0A075B6X5 111 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 IGKV1D-8A0A087WSZ0 117 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 A0A1W2PRX2 142 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 F2RL1P55085 397 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 ACTBP60709 375 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 VBP1P61758 197 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 ZNF260Q3ZCT1 412 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 KHDC1LQ5JSQ8 128 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 NDUFA11Q86Y39 141 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 CROCCP3Q8IVE0 287 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 FOXRED2Q8IWF2 684 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 OR4X2Q8NGF9 303 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 OR8H1Q8NGG4 311 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 ST6GALNAC5Q9BVH7 336 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 MRPS26Q9BYN8 205 aaKnown RBP9.36□□□□□ -0.91
RAB5C-204ENST00000547517 OR2D2Q9H210 308 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 ABCG5Q9H222 651 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 PLSCR3Q9NRY6 295 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 SPATA2Q9UM82 520 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 MGAM2Q2M2H8 2515 aa9.36□□□□□ -0.91
RAB5C-204ENST00000547517 TRBV6-7A0A0A0MS04 114 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 PSMB11A5LHX3 300 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 OR5H14A6NHG9 310 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 H0YJW9 148 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 H7C2Y5 167 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 M0R1X1 148 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 WIPF1O43516 503 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 SSX5O60225 188 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 TMEM127O75204 238 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 IGHG2P01859 326 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 OR8U9P0C7N5 309 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 CT45A6P0DMU7 189 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 CT45A5P0DMU8 189 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 CT45A7P0DMV0 189 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 CNTFRP26992 372 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 PITPNAQ00169 270 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 SRSF7Q16629 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
RAB5C-204ENST00000547517 PNLIPRP3Q17RR3 467 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 TCTEX1D4Q5JR98 221 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 UBE2NLQ5JXB2 153 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 Q6ZS49 121 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 ZNF329Q86UD4 541 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 FAM71E2Q8N5Q1 922 aa9.35□□□□□ -0.91
RAB5C-204ENST00000547517 DRAXINQ8NBI3 349 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms