RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CT55Q8WUE5 264 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 TP53RKQ96S44 253 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 TCFL5Q9UL49 500 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 ATP23Q9Y6H3 246 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 A0A087WV48 116 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 CTSBP07858 339 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 MISP3Q96FF7 219 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 PSG4Q00888 419 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.73■□□□□ 0.27
SUDS3-204ENST00000543473 MARS2Q96GW9 593 aaKnown RBP16.73■□□□□ 0.27
SUDS3-204ENST00000543473 GNB4Q9HAV0 340 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 NCOR1O75376 2440 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 HINT1P49773 126 aaPredicted RBP16.73■□□□□ 0.27
SUDS3-204ENST00000543473 MRPS11P82912 194 aaKnown RBP16.73■□□□□ 0.27
SUDS3-204ENST00000543473 SPATA45Q537H7 98 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 PET117Q6UWS5 81 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 PDPNQ86YL7 162 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 RTBDNQ9BSG5 229 aaPredicted RBP16.73■□□□□ 0.27
SUDS3-204ENST00000543473 PARLQ9H300 379 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 RPRMQ9NS64 109 aa16.73■□□□□ 0.27
SUDS3-204ENST00000543473 TRAV17A0A0B4J275 112 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 F8VVB4 439 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 F8VWA3 439 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 DNPH1O43598 174 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 LIFP15018 202 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 NPY1RP25929 384 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 CYB5R2Q6BCY4 276 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 TXNDC17Q9BRA2 123 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 A0A0G2JMZ2 1700 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 KBTBD11O94819 623 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 SRP19P09132 144 aaKnown RBP16.72■□□□□ 0.27
SUDS3-204ENST00000543473 CD82P27701 267 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 PPOXP50336 477 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 MFAP2P55001 183 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 OR2T6Q8NHC8 308 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 ADTRPQ96IZ2 230 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 OR6C3Q9NZP0 311 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 UQCR10Q9UDW1 63 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 IL19Q9UHD0 177 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 A0A0J9YW62 118 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 C17orf51A8MQB3 221 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 LYZL6O75951 148 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 SLC25A45Q8N413 288 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 AAMDCQ9H7C9 122 aa16.72■□□□□ 0.27
SUDS3-204ENST00000543473 LRRC3CA6NJW4 275 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 H0YIZ8 118 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 UCP3P55916 312 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 CXXC4Q9H2H0 198 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 TINAGQ9UJW2 476 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 UBE2CO00762 179 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 GFI1Q99684 422 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 RNF24Q9Y225 148 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 RBP4P02753 201 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 ZNF766Q5HY98 468 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 LINC00114Q6XXX2 140 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 IGSF23A1L1A6 192 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 GZMHP20718 246 aa16.71■□□□□ 0.27
SUDS3-204ENST00000543473 SMPD2O60906 423 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 OR8G5Q8NG78 346 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 OR4F17Q8NGA8 305 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 TMEM74BQ9NUR3 256 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
SUDS3-204ENST00000543473 C3orf80F5H4A9 247 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 RAMP1O60894 148 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 OR2J3O76001 311 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 P01737 135 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 RPL11P62913 178 aaKnown RBP16.7■□□□□ 0.26
SUDS3-204ENST00000543473 ABCA7Q8IZY2 2146 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 CEP250Q9BV73 2442 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 IZUMO4Q1ZYL8 232 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 SNAI3Q3KNW1 292 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 OR8I2Q8N0Y5 310 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 ZNF501Q96CX3 271 aaPredicted RBP16.7■□□□□ 0.26
SUDS3-204ENST00000543473 OR2V2Q96R30 315 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 MRPL18Q9H0U6 180 aaKnown RBP16.7■□□□□ 0.26
SUDS3-204ENST00000543473 PXMP4Q9Y6I8 212 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 ISLRO14498 428 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 C1QL2Q7Z5L3 287 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 FGFRL1Q8N441 504 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 Q8WTZ3 238 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 ABHD14AQ9BUJ0 271 aa16.7■□□□□ 0.26
SUDS3-204ENST00000543473 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 CEACAM21Q3KPI0 293 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 RIF1Q5UIP0 2472 aaKnown RBP16.69■□□□□ 0.26
SUDS3-204ENST00000543473 PRR32B1ATL7 298 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 VWCEQ96DN2 955 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 GALNT14Q96FL9 552 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 NPVFQ9HCQ7 196 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 A0A1W2PN81 502 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A10PA6NDY2 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A18PA6NE21 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A16PA6NEW6 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A20PA6NIJ5 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A8PA6NJQ4 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A7PA6NKC0 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A22PA8MWA6 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A12PA8MX19 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A5PA8MXJ8 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 FAM90A23PA8MXZ1 464 aa16.69■□□□□ 0.26
SUDS3-204ENST00000543473 IGHMP01871 453 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms