RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SERPINB11Q96P15 392 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 OR2A5Q96R48 311 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PDCD1LG2Q9BQ51 273 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TCEAL7Q9BRU2 100 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 MROQ9BYG7 248 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 SLC38A1Q9H2H9 487 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TMEM100Q9NV29 134 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 MRM2Q9UI43 246 aaKnown RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ENPP5Q9UJA9 477 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 NUBP2Q9Y5Y2 271 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CHD5Q8TDI0 1954 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TACC2O95359 2948 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CELSR1Q9NYQ6 3014 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 MYO7BQ6PIF6 2116 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 HIVEP3Q5T1R4 2406 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 RTTNQ86VV8 2226 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 PIKFYVEQ9Y2I7 2098 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 SPTY2D1-AS1A0A0U1RR47 76 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 METTL15A6NJ78 407 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 RFPL4AA6NLU0 287 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR2AT4A6NND4 320 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 LRRN3E7EW58 273 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 RFPL4AL1F8VTS6 287 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 H0Y9J4 135 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 RNASEK-C17orf49H0YIS7 233 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 M0R1B8 84 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 SULT1C2O00338 296 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 MANBAO00462 879 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 TAAR5O14804 337 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 IFNGP01579 166 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CRHP06850 196 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR56A5P0C7T3 313 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CD36P16671 472 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 ELK1P19419 428 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 PSMB6P28072 239 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 TEAD1P28347 426 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CD40LGP29965 261 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 MAGEA2P43356 314 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 GALR1P47211 349 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CRISP3P54108 245 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 NCALDP61601 193 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CDK5Q00535 292 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 IL5RAQ01344 420 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 DEFA6Q01524 100 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 ADIGQ0VDE8 80 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 KRR1Q13601 381 aaKnown RBP2.85□□□□□ -1.95
SNHG1-217ENST00000541578 C16orf72Q14CZ0 275 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CDK10Q15131 360 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR4D1Q15615 310 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CDNFQ49AH0 187 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 C9orf64Q5T6V5 341 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 HBMQ6B0K9 141 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF470Q6ECI4 717 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 XKRXQ6PP77 449 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OPN5Q6U736 354 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 SPNS3Q6ZMD2 512 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 LINC00299Q6ZSB3 139 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CRLF3Q8IUI8 442 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CDRT4Q8N9R6 151 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR2D3Q8NGH3 330 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR5M1Q8NGP8 315 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR5H6Q8NGV6 325 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR2L8Q8NGY9 312 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR51Q1Q8NH59 317 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 OR10J5Q8NHC4 309 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 LMX1AQ8TE12 382 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 DCAKDQ8WVC6 231 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 MAFIPQ8WZ33 124 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 S100PBPQ96BU1 408 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 PPP3R2Q96LZ3 170 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 C2orf88Q9BSF0 95 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 TMEM243Q9BU79 118 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 DDA1Q9BW61 102 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 SFXN3Q9BWM7 321 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 PARD6GQ9BYG4 376 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-217ENST00000541578 MRPS26Q9BYN8 205 aaKnown RBP2.85□□□□□ -1.95
SNHG1-217ENST00000541578 SLC17A9Q9BYT1 436 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 CCDC90BQ9GZT6 254 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 PLEKHA1Q9HB21 404 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 ACOT13Q9NPJ3 140 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 NLE1Q9NVX2 485 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-217ENST00000541578 DNAJC27Q9NZQ0 273 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF223Q9UK11 482 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-217ENST00000541578 PSMD13Q9UNM6 376 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 POFUT2Q9Y2G5 429 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 SIGLEC9Q9Y336 463 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 ORC6Q9Y5N6 252 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 WIF1Q9Y5W5 379 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 NYNRINQ9P2P1 1898 aaKnown RBP2.85□□□□□ -1.95
SNHG1-217ENST00000541578 F8P00451 2351 aa2.85□□□□□ -1.95
SNHG1-217ENST00000541578 MAP1AP78559 2803 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TRAV8-6A0A0B4J262 113 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 IGHV5-10-1A0A0J9YXX1 117 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 SMIM23A6NLE4 172 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 DNASE2O00115 360 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TNFRSF11BO00300 401 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 SLC31A1O15431 190 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms