RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CD74P04233 296 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PNLIPP16233 465 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 NAAAQ02083 359 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ECSCRQ19T08 205 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ISXQ2M1V0 245 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 NDUFAF3Q9BU61 184 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 CHST5Q9GZS9 411 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 F11RQ9Y624 299 aaKnown RBP8.67□□□□□ -1.02
COL4A6-208ENST00000538570 TNRC6CQ9HCJ0 1690 aaKnown RBP8.67□□□□□ -1.02
COL4A6-208ENST00000538570 TRAV8-7A0A075B6U6 113 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 IGHV3OR15-7A0A075B7D8 119 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 COL9A1P20849 921 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PSG6Q00889 435 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 C19orf54Q5BKX5 351 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PTX4Q96A99 478 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
COL4A6-208ENST00000538570 ZNF71Q9NQZ8 489 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-208ENST00000538570 TMEM189A5PLL7 270 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 BGLAPP02818 100 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 TRIP6Q15654 476 aaKnown RBP8.66□□□□□ -1.02
COL4A6-208ENST00000538570 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 BCL2P10415 239 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 PPP1CCP36873 323 aaKnown RBP8.66□□□□□ -1.02
COL4A6-208ENST00000538570 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 HYPMO75409 117 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 EML2O95834 649 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 TRGC1P0CF51 173 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 BTF3P20290 206 aaKnown RBP8.66□□□□□ -1.02
COL4A6-208ENST00000538570 MFAP2P55001 183 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 MFAP4P55083 255 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 P2RX4Q99571 388 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 SOSTQ9BQB4 213 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 KLK13Q9UKR3 277 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.66□□□□□ -1.02
COL4A6-208ENST00000538570 A8MWL6 223 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 TNFSF14O43557 240 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 OTX1P32242 354 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-208ENST00000538570 SERF2P84101 59 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 HIKESHIQ53FT3 197 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 CCDC144NLQ6NUI1 221 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 INO80CQ6PI98 192 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-208ENST00000538570 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
COL4A6-208ENST00000538570 KLK2P20151 261 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 MAS1LP35410 378 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 COL10A1Q03692 680 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 IRF3Q14653 427 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 MMDQ15546 238 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 PTPMT1Q8WUK0 201 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-208ENST00000538570 MS4A5Q9H3V2 200 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 IGHV3-21A0A0B4J1V1 117 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 UBE2L6O14933 153 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 HPRT1P00492 218 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 IL4P05112 153 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 FCARP24071 287 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 DCAF12L2Q5VW00 463 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 NPVFQ9HCQ7 196 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 DRD3P35462 400 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 C1orf210Q8IVY1 113 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 MYO7AQ13402 2215 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 TRAV39A0A0B4J263 110 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 NTN1O95631 604 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 TNFSF10P50591 281 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 SYT8Q8NBV8 401 aa8.65□□□□□ -1.02
COL4A6-208ENST00000538570 SLC25A10Q9UBX3 287 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-208ENST00000538570 RPP25Q9BUL9 199 aaKnown RBP8.65□□□□□ -1.03
COL4A6-208ENST00000538570 FNDC4Q9H6D8 234 aaPredicted RBP8.65□□□□□ -1.03
COL4A6-208ENST00000538570 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.03
COL4A6-208ENST00000538570 EFNB2P52799 333 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 WDR25Q64LD2 544 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-208ENST00000538570 NUP205Q92621 2012 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 KBTBD11O94819 623 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 SRSF4Q08170 494 aaKnown RBP8.64□□□□□ -1.03
COL4A6-208ENST00000538570 NHLRC3Q5JS37 347 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 LILRA6Q6PI73 481 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 LIMS2Q7Z4I7 341 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 HDHD3Q9BSH5 251 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-208ENST00000538570 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-208ENST00000538570 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 LOXL3P58215 753 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 BHLHA9Q7RTU4 235 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 SPSB2Q99619 263 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 ST6GALNAC2Q9UJ37 374 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 F5P12259 2224 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 SCN9AQ15858 1988 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM78Q5T7P6 136 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 TMEM91Q6ZNR0 172 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 GUCD1Q96NT3 240 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 HSPB7Q9UBY9 170 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 CYSLTR1Q9Y271 337 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 MYO5AQ9Y4I1 1855 aaKnown RBP8.64□□□□□ -1.03
COL4A6-208ENST00000538570 C21orf140B9A014 251 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 FCGR3AP08637 254 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 CCL3P10147 92 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 TTC3P53804 2025 aa8.64□□□□□ -1.03
COL4A6-208ENST00000538570 ATP5IP56385 69 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-208ENST00000538570 TPTE2P1Q5T6R2 138 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms