RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ZNF879B4DU55 563 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 F5H5K5 113 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 M0QYV0 167 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 SULT1C2O00338 296 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 STK16O75716 305 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 TNFAIP8O95379 198 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 SLC35E2BP0CK96 405 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 CDK2P24941 298 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 OPRM1P35372 400 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 OR1E2P47887 323 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 TSPEAR-AS2P59090 65 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 RAB8AP61006 207 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 FGF12P61328 243 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 DYNLL1P63167 89 aaKnown RBP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 ERHP84090 104 aaKnown RBP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 USF2Q15853 346 aaPredicted RBP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 FAM201AQ5SY85 155 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 Q6ZTI0 123 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 COPS6Q7L5N1 327 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 SLC13A5Q86YT5 568 aaPredicted RBP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 FNDC9Q8TBE3 224 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 RNF133Q8WVZ7 376 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 TMIGD2Q96BF3 282 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 ABHD14BQ96IU4 210 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 ZNF426Q9BUY5 554 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 TIMM21Q9BVV7 248 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 ZNF471Q9BX82 626 aaPredicted RBP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 C11orf1Q9H5F2 150 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 AGPAT3Q9NRZ7 376 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 CHMP5Q9NZZ3 219 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 DNAJC12Q9UKB3 198 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 POFUT2Q9Y2G5 429 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 MRPS16Q9Y3D3 137 aaKnown RBP0.88□□□□□ -2.27
CCDC7-208ENST00000537047 MAP3K19Q56UN5 1328 aa0.88□□□□□ -2.27
CCDC7-208ENST00000537047 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
CCDC7-208ENST00000537047 GOLGA8QA0A0J9YX86 632 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 C2orf74A8MZ97 194 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 SYNGR1O43759 233 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 CD7P09564 240 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 ESDP10768 282 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 ORM2P19652 201 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 AGTR1P30556 359 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 ETV1P50549 477 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 ACTBP60709 375 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 ACTG1P63261 375 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 XRCC4Q13426 336 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 SYCP1Q15431 976 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 TPRXLQ17RH7 258 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 C2orf91Q6ZV80 131 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 C17orf78Q8N4C9 275 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 TNFAIP8L1Q8WVP5 186 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 FAM210AQ96ND0 272 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 TRNT1Q96Q11 434 aaKnown RBP0.87□□□□□ -2.27
CCDC7-208ENST00000537047 C16orf95Q9H693 158 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 PRO2289Q9P1D8 64 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 GLS2Q9UI32 602 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 HHLA2Q9UM44 414 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 SNX12Q9UMY4 172 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 SNX10Q9Y5X0 201 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 CCDC88CQ9P219 2028 aa0.87□□□□□ -2.27
CCDC7-208ENST00000537047 DNMT1P26358 1616 aaKnown RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 IGKV2-40A0A087WW87 121 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 C9J4A7 227 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 IGKV2D-40P01614 121 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 IGLV3-27P01718 113 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 NPPCP23582 126 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 CRHBPP24387 322 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 DLX6P56179 175 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 TAS2R45P59539 299 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 ZNF90Q03938 601 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 C1DQ13901 141 aaKnown RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 CLEC12BQ2HXU8 276 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 TMEM75Q8N9X5 138 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 DYNC2LI1Q8TCX1 351 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 SMIM12Q96EX1 92 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 TMEM56Q96MV1 263 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 TBX5Q99593 518 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 NKX6-2Q9C056 277 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 EIF5A2Q9GZV4 153 aaKnown RBP0.86□□□□□ -2.27
CCDC7-208ENST00000537047 MED28Q9H204 178 aa0.86□□□□□ -2.27
CCDC7-208ENST00000537047 C11orf86A6NJI1 115 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 SLC17A3O00476 420 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 ZW10O43264 779 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 GNRH2O43555 120 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 MPZL2O60487 215 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 ARL6IP5O75915 188 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 GP1BAP07359 652 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 PVALBP20472 110 aaPredicted RBP0.85□□□□□ -2.27
CCDC7-208ENST00000537047 SYT1P21579 422 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 STC1P52823 247 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 DAD1P61803 113 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 TBC1D28Q2M2D7 210 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 HSP90B2PQ58FF3 399 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 PABPC1L2AQ5JQF8 200 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 SCGB1D4Q6XE38 83 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 PLCZ1Q86YW0 608 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 NATD1Q8N6N6 113 aa0.85□□□□□ -2.27
CCDC7-208ENST00000537047 SPERTQ8NA61 448 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms