RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 AKR1E2Q96JD6 320 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 AGMATQ9BSE5 352 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 ST6GALNAC5Q9BVH7 336 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 AUNIPQ9H7T9 357 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 RDH8Q9NYR8 311 aa18.14■□□□□ 0.49
SFSWAP-204ENST00000535399 TRBV6-7A0A0A0MS04 114 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 ZNF736B4DX44 427 aaPredicted RBP18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 XRCC3O43542 346 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 AMY1AP04745 511 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 AMY2AP04746 511 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 CD1BP29016 333 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 KRTAP10-3P60369 221 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 HES1Q14469 280 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 SHISA2Q6UWI4 295 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 OR2T6Q8NHC8 308 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 EDARADDQ8WWZ3 215 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 S100A16Q96FQ6 103 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 ZNF251Q9BRH9 671 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 MRPL20Q9BYC9 149 aaKnown RBP18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 PRSS22Q9GZN4 317 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 PIPOXQ9P0Z9 390 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 COMMD3Q9UBI1 195 aa18.13■□□□□ 0.49
SFSWAP-204ENST00000535399 RAB29O14966 203 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 BET1O15155 118 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 TMEM11P17152 192 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 HNF4GQ14541 408 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 FAM71F2Q6NXP2 309 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 Q8N6K4 173 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 DTX3Q8N9I9 347 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 ACOT12Q8WYK0 555 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 ABHD14BQ96IU4 210 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 EAF1Q96JC9 268 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 NABP2Q9BQ15 211 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 MOB4Q9Y3A3 225 aa18.12■□□□□ 0.49
SFSWAP-204ENST00000535399 HAX1O00165 279 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 EIF4EP06730 217 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 PTHLHP12272 177 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 SRSF4Q08170 494 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 LSAMPQ13449 338 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 SPCS2Q15005 226 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 OR10J5Q8NHC4 309 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 RAB2BQ8WUD1 216 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 RBMXL1Q96E39 390 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 SERTAD4Q9NUC0 356 aa18.11■□□□□ 0.49
SFSWAP-204ENST00000535399 ZNF182P17025 639 aaPredicted RBP18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 TMBIM6P55061 237 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 RPL39P5Q59GN2 51 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 OR2T10Q8NGZ9 312 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 CMTM3Q96MX0 182 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 BCL7BQ9BQE9 202 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 GHITMQ9H3K2 345 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 SCOCQ9UIL1 159 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 RNF150Q9ULK6 438 aa18.1■□□□□ 0.49
SFSWAP-204ENST00000535399 M0QZK8 103 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 MOSP00540 346 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 APOA1P02647 267 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 TAS2R20P59543 309 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 ABCA11PQ4W5N1 156 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 TMEM69Q5SWH9 247 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 C11orf88Q6PI97 169 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 S1PR3Q99500 378 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 CITED1Q99966 193 aa18.09■□□□□ 0.49
SFSWAP-204ENST00000535399 SH2D7A6NKC9 451 aaPredicted RBP18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 HPGDSO60760 199 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 PROP1O75360 226 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 CNIH2Q6PI25 160 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 HOGA1Q86XE5 327 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 H1FOOQ8IZA3 346 aaPredicted RBP18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 GVQW1Q8N7I0 195 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 C5orf56Q8N8D9 126 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 AP3S1Q92572 193 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 GINS4Q9BRT9 223 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 PLSCR3Q9NRY6 295 aa18.08■□□□□ 0.48
SFSWAP-204ENST00000535399 FGF16O43320 207 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 CT45A6P0DMU7 189 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 CT45A5P0DMU8 189 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 CT45A7P0DMV0 189 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 MZT2AQ6P582 158 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 ANXA10Q9UJ72 324 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 ZNF221Q9UK13 617 aa18.07■□□□□ 0.48
SFSWAP-204ENST00000535399 CTXN2P0C2S0 81 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 OR8U9P0C7N5 309 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 ELK1P19419 428 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 GPR12P47775 334 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 TMEM95Q3KNT9 176 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 KLHDC1Q8N7A1 406 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 BEST4Q8NFU0 473 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 OR8U1Q8NH10 309 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 WNT10AQ9GZT5 417 aa18.06■□□□□ 0.48
SFSWAP-204ENST00000535399 HLA-DQB1P01920 261 aa18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 VDAC2P45880 294 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 CBX5P45973 191 aa18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 Q8N9W7 124 aa18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 ISOC1Q96CN7 298 aa18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 GAB2Q9UQC2 676 aa18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 CEPT1Q9Y6K0 416 aa18.05■□□□□ 0.48
SFSWAP-204ENST00000535399 H0YJW9 148 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 H3BMQ9 156 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 VSIG10L2P0DP72 767 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms