RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 C1orf100Q5SVJ3 147 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 PHYHIPQ92561 330 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 SCN3BQ9NY72 215 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 SCOCQ9UIL1 159 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 A3GALT2U3KPV4 340 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 H7C2Y5 167 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 ZNF616Q08AN1 781 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 GLDNQ6ZMI3 551 aaPredicted RBP13.86□□□□□ -0.19
PCF11-206ENST00000533018 SVOPQ8N4V2 548 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 NPBQ8NG41 125 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 MYOZ3Q8TDC0 251 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 TMEM203Q969S6 136 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 TM2D1Q9BX74 207 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 FBXL15Q9H469 300 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 PLGRKTQ9HBL7 147 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 SLC23A1Q9UHI7 598 aa13.86□□□□□ -0.19
PCF11-206ENST00000533018 LSM4Q9Y4Z0 139 aaKnown RBP13.86□□□□□ -0.19
PCF11-206ENST00000533018 A0A1W2PN81 502 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 I3L521 148 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
PCF11-206ENST00000533018 SLC22A1O15245 554 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 HSPA12AO43301 675 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 BPNT1O95861 308 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 NAPSAO96009 420 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 HSMCR30P0CW71 290 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 CHRNA7P36544 502 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 GNB1P62873 340 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 KIAA0141Q14154 515 aaPredicted RBP13.85□□□□□ -0.19
PCF11-206ENST00000533018 P2RY14Q15391 338 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 RNLSQ5VYX0 342 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 FAM71F2Q6NXP2 309 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 MOB1BQ7L9L4 216 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 OR6M1Q8NGM8 313 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 UFD1Q92890 307 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 ABHD14BQ96IU4 210 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 ASCL2Q99929 193 aa13.85□□□□□ -0.19
PCF11-206ENST00000533018 URM1Q9BTM9 101 aaKnown RBP13.85□□□□□ -0.19
PCF11-206ENST00000533018 ZNF256Q9Y2P7 627 aaPredicted RBP13.85□□□□□ -0.19
PCF11-206ENST00000533018 TMEM14DPA8MWL7 114 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 SOCS1O15524 211 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 NDUFA3O95167 84 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 CT45A6P0DMU7 189 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 CT45A5P0DMU8 189 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 CT45A7P0DMV0 189 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 ARSBP15848 533 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 MC5RP33032 325 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 CEACAM6P40199 344 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 MINDY2Q8NBR6 621 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 CASTOR1Q8WTX7 329 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 CLCC1Q96S66 551 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 HDHD3Q9BSH5 251 aaPredicted RBP13.84□□□□□ -0.19
PCF11-206ENST00000533018 PARP12Q9H0J9 701 aaKnown RBP13.84□□□□□ -0.19
PCF11-206ENST00000533018 ALX4Q9H161 411 aaPredicted RBP13.84□□□□□ -0.19
PCF11-206ENST00000533018 RIMS4Q9H426 269 aaPredicted RBP13.84□□□□□ -0.19
PCF11-206ENST00000533018 AK3Q9UIJ7 227 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 LSM2Q9Y333 95 aaKnown RBP13.84□□□□□ -0.19
PCF11-206ENST00000533018 U3KQK5 164 aa13.84□□□□□ -0.19
PCF11-206ENST00000533018 A0A0A6YYD4 124 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 OR5H14A6NHG9 310 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 RRHO14718 337 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 OVOL1O14753 267 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 UCHL1P09936 223 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 ZBTB25P24278 435 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 INSL3P51460 131 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 CX3CL1P78423 397 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 QRFPP83859 136 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 NDPQ00604 133 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 RUNX1Q01196 453 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 ZNF660Q6AZW8 331 aaPredicted RBP13.83□□□□□ -0.2
PCF11-206ENST00000533018 ZNF880Q6PDB4 577 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 DCUN1D4Q92564 292 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 LPAR5Q9H1C0 372 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 OR1A1Q9P1Q5 309 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 FBXO7Q9Y3I1 522 aa13.83□□□□□ -0.2
PCF11-206ENST00000533018 ANKRD65E5RJM6 399 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 H0YJW9 148 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 SAP30O75446 220 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 TMEM267Q0VDI3 215 aaPredicted RBP13.82□□□□□ -0.2
PCF11-206ENST00000533018 ASPHD1Q5U4P2 390 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 ZNF429Q86V71 674 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 DRAXINQ8NBI3 349 aaPredicted RBP13.82□□□□□ -0.2
PCF11-206ENST00000533018 EDARADDQ8WWZ3 215 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 GHITMQ9H3K2 345 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 RNF150Q9ULK6 438 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 FOXA2Q9Y261 457 aaPredicted RBP13.82□□□□□ -0.2
PCF11-206ENST00000533018 TPRKBQ9Y3C4 175 aa13.82□□□□□ -0.2
PCF11-206ENST00000533018 AK6Q9Y3D8 172 aaKnown RBP13.82□□□□□ -0.2
PCF11-206ENST00000533018 LINC01619G3V211 115 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 FCN1O00602 326 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 SCTP09683 121 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 CPEP16870 476 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 CD40LGP29965 261 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 VEGFCP49767 419 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 SLURP1P55000 103 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 HLA-DRB3P79483 266 aa13.81□□□□□ -0.2
PCF11-206ENST00000533018 RAB11BQ15907 218 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms