RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ST8SIA5O15466 376 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 BPNT1O95861 308 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 UCHL1P09936 223 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 OR8U8P0C7N1 319 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-207ENST00000531727 ECI1P42126 302 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 MED22Q15528 200 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 SETD6Q8TBK2 473 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 PRR25Q96S07 402 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 PLEKHJ1Q9NW61 149 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
CPSF1-207ENST00000531727 A0A0A6YYD4 124 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 RAB9AP51151 201 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 ZNF616Q08AN1 781 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 ZNF260Q3ZCT1 412 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 RPL39P5Q59GN2 51 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 ASPHD1Q5U4P2 390 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 MINDY2Q8NBR6 621 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 OR1N2Q8NGR9 330 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 RIMS4Q9H426 269 aaPredicted RBP13.08□□□□□ -0.32
CPSF1-207ENST00000531727 SCN3BQ9NY72 215 aa13.08□□□□□ -0.32
CPSF1-207ENST00000531727 TRBV6-6A0A0A6YYG2 114 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 OR5H14A6NHG9 310 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 ITGB1BP1O14713 200 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 CT45A6P0DMU7 189 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 CT45A5P0DMU8 189 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 CT45A7P0DMV0 189 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 GNB1P62873 340 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 NDPQ00604 133 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 IRF3Q14653 427 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 C19orf54Q5BKX5 351 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 LIPKQ5VXJ0 399 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 UFD1Q92890 307 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 OR5B12Q96R08 314 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 URM1Q9BTM9 101 aaKnown RBP13.07□□□□□ -0.32
CPSF1-207ENST00000531727 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
CPSF1-207ENST00000531727 LPAR5Q9H1C0 372 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
CPSF1-207ENST00000531727 KMT2CQ8NEZ4 4911 aaKnown RBP13.07□□□□□ -0.32
CPSF1-207ENST00000531727 RRHO14718 337 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 SOCS1O15524 211 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 MC5RP33032 325 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 INSL3P51460 131 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-207ENST00000531727 HLA-DRB3P79483 266 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 ZNF660Q6AZW8 331 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-207ENST00000531727 ABHD14BQ96IU4 210 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 GFI1Q99684 422 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 HDHD3Q9BSH5 251 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-207ENST00000531727 FBXL15Q9H469 300 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 AK3Q9UIJ7 227 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 ZNF256Q9Y2P7 627 aaPredicted RBP13.06□□□□□ -0.32
CPSF1-207ENST00000531727 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
CPSF1-207ENST00000531727 A0A1W2PN81 502 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 H0YJW9 148 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 SLC17A2O00624 439 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 ARSBP15848 533 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 CHRNA7P36544 502 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 CX3CL1P78423 397 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 PLGLAQ15195 96 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 P2RY14Q15391 338 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 GLDNQ6ZMI3 551 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-207ENST00000531727 TMEM91Q6ZNR0 172 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 FAM89BQ8N5H3 189 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 TCTEX1D1Q8N7M0 179 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 EDARADDQ8WWZ3 215 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 TMEM203Q969S6 136 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 PLGRKTQ9HBL7 147 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 OR1A1Q9P1Q5 309 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 HSF4Q9ULV5 492 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 MGAT4AQ9UM21 535 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 FOXA2Q9Y261 457 aaPredicted RBP13.05□□□□□ -0.32
CPSF1-207ENST00000531727 WASHC3Q9Y3C0 194 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 U3KQK5 164 aa13.05□□□□□ -0.32
CPSF1-207ENST00000531727 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-207ENST00000531727 SOX15O60248 233 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 RBBP9O75884 186 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 GSTP1P09211 210 aaKnown RBP13.04□□□□□ -0.32
CPSF1-207ENST00000531727 ZBTB25P24278 435 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 TPBGQ13641 420 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 TRAM1Q15629 374 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 OR5AN1Q8NGI8 311 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 DCUN1D4Q92564 292 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 C11orf54Q9H0W9 315 aaPredicted RBP13.04□□□□□ -0.32
CPSF1-207ENST00000531727 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 TPRKBQ9Y3C4 175 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 NUBP2Q9Y5Y2 271 aa13.04□□□□□ -0.32
CPSF1-207ENST00000531727 H7C2Y5 167 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 FCN1O00602 326 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 OVOL1O14753 267 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 HSPA12AO43301 675 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 HSMCR30P0CW71 290 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 EGR2P11161 476 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-207ENST00000531727 CEACAM6P40199 344 aa13.03□□□□□ -0.32
CPSF1-207ENST00000531727 RPS25P62851 125 aaKnown RBP13.03□□□□□ -0.32
CPSF1-207ENST00000531727 RAB11BQ15907 218 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms