RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NCBP2LA6PVI3 153 aaKnown RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 H7C2Y5 167 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 RGS5O15539 181 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 FGF16O43320 207 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 SLC22A5O76082 557 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 APOA1P02647 267 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 GSTT2P0CG29 244 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 GSTT2BP0CG30 244 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 SAA2P0DJI9 122 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 VSIG10L2P0DP72 767 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 MC5RP33032 325 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 PRSS3P35030 304 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 TAS2R20P59543 309 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 RELBQ01201 579 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 LSAMPQ13449 338 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 HNF4GQ14541 408 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 CTF1Q16619 201 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF260Q3ZCT1 412 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 ABCA11PQ4W5N1 156 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 IGSF11Q5DX21 431 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 C9orf152Q5JTZ5 239 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 UTF1Q5T230 341 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 CNIH2Q6PI25 160 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF833PQ6ZTB9 187 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 BEST4Q8NFU0 473 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 LINC01006Q8NI28 216 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 PIFOQ8TCI5 191 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 C15orf40Q8WUR7 153 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 WFDC12Q8WWY7 111 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 MAFIPQ8WZ33 124 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 CFHR4Q92496 578 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 ST6GALNAC6Q969X2 333 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 RASL11BQ9BPW5 248 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF251Q9BRH9 671 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 MRPL20Q9BYC9 149 aaKnown RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 NAA50Q9GZZ1 169 aaKnown RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 C11orf54Q9H0W9 315 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR2D2Q9H210 308 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 IFI27L2Q9H2X8 130 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 AUNIPQ9H7T9 357 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 NECAP2Q9NVZ3 263 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 CCDC59Q9P031 241 aaKnown RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 KIAA1456Q9P272 454 aa4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 MRPS7Q9Y2R9 242 aaKnown RBP4.33□□□□□ -1.72
HMGB1P40-201ENST00000525121 TRBV6-7A0A0A0MS04 114 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 FAM90A9PA6NNJ1 464 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 M0QZ24 198 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 M0R1X1 148 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 KCNAB3O43448 404 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 HPGDSO60760 199 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 RBBP9O75884 186 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 EIF4EP06730 217 aaKnown RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR8U9P0C7N5 309 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR3A3P47888 321 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 LUMP51884 338 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF134P52741 427 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 TAS2R46P59540 309 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 HERV-K104P61576 105 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 TAGLNQ01995 201 aaKnown RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 DIAPH2-AS1Q14236 149 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 HABP2Q14520 560 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 HERPUD1Q15011 391 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 PLGLAQ15195 96 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 MMDQ15546 238 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 RTL8BQ17RB0 113 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 FAM53AQ6NSI3 398 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 FAM131AQ6UXB0 335 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 CCBE1Q6UXH8 406 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 Q6ZPA2 131 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 HOGA1Q86XE5 327 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 FOXRED2Q8IWF2 684 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 Q8N2B8 174 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 KLHDC1Q8N7A1 406 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR4X2Q8NGF9 303 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR5H2Q8NGV7 314 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 OR8U1Q8NH10 309 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 SGMS2Q8NHU3 365 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 TAF15Q92804 592 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 BORCS5Q969J3 196 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ISOC1Q96CN7 298 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ABHD14BQ96IU4 210 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ADTRPQ96IZ2 230 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 CYYR1Q96J86 154 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 EAF1Q96JC9 268 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 NABP2Q9BQ15 211 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 GON7Q9BXV9 100 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZNF702PQ9H963 129 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 SCPEP1Q9HB40 452 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 LIN7CQ9NUP9 197 aaKnown RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ANXA10Q9UJ72 324 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ELF5Q9UKW6 265 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 RNF150Q9ULK6 438 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 WASHC3Q9Y3C0 194 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ZFHX3Q15911 3703 aa4.32□□□□□ -1.72
HMGB1P40-201ENST00000525121 ATRQ13535 2644 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 IGKV1-6A0A0C4DH72 117 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 H3BMQ9 156 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 SULT1C2O00338 296 aa4.31□□□□□ -1.72
HMGB1P40-201ENST00000525121 NBR2O15453 112 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms