RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 GPR35Q9HC97 309 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 ICE1Q9Y2F5 2266 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 SPINK4O60575 86 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 NDUFB4O95168 129 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 G6PCP35575 357 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 ERVFC1-1P60608 527 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZNF90Q03938 601 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 DNLZQ5SXM8 178 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 FAM58AQ8N1B3 248 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 OCIAD1Q9NX40 245 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 IL36GQ9NZH8 169 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR6C3Q9NZP0 311 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGLV3-32A0A0A0MS00 114 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 ETV2O00321 342 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZFP36L1Q07352 338 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 TCF23Q7RTU1 214 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 CARFQ8N187 725 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 VN1R17PQ8TDU5 208 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 TECTBQ96PL2 329 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 TCFL5Q9UL49 500 aa10.92□□□□□ -0.66
TRAPPC9-208ENST00000520857 NGFP01138 241 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR10J1P30954 320 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 THBS3P49746 956 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 KRTDAPP60985 99 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 WDR74Q6RFH5 385 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 C20orf204Q6ZNR8 217 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 NUFIP2Q7Z417 695 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 BEND2Q8NDZ0 799 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 PLPPR2Q96GM1 343 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 RIMS4Q9H426 269 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 SLC25A6P12236 298 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 CA6P23280 308 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 CDC34P49427 236 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR5I1Q13606 314 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 ACSM6Q6P461 480 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 TGIF2LYQ8IUE0 185 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 FGFRL1Q8N441 504 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 CPEB3Q8NE35 698 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 FAM234AQ9H0X4 552 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZNF552Q9H707 407 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 FSCN3Q9NQT6 498 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 KCNIP1Q9NZI2 227 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 F6UZH7 168 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGKV1D-33P01593 117 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGKV1-33P01594 117 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 NTF4P34130 210 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 PI4KAP42356 2102 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR3A1P47881 315 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 ASCL4Q6XD76 172 aa10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 CISD2Q8N5K1 135 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-208ENST00000520857 B4E171 279 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 SYNGR4O95473 234 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 NAPSAO96009 420 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGLV3-19P01714 112 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 IL3RAP26951 378 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TSPAN7P41732 249 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 PDLIM3Q53GG5 364 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM42Q69YG0 159 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 MANBALQ9NQG1 85 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGLV3-12A0A075B6K2 115 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 NXPH2O95156 264 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 HPRT1P00492 218 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TFF3Q07654 80 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMPRSS7Q7RTY8 843 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 IMMP2LQ96T52 175 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM147Q9BVK8 224 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 HAPLN4Q86UW8 402 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 RBM14Q96PK6 669 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 NEU1Q99519 415 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 HSPB9Q9BQS6 159 aa10.9□□□□□ -0.66
TRAPPC9-208ENST00000520857 REV3LO60673 3130 aa10.9□□□□□ -0.67
TRAPPC9-208ENST00000520857 C17orf112F2Z3M2 114 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 IGKV1-5P01602 117 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 COX5BP10606 129 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 H2BFWTQ7Z2G1 175 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 BTF3L4Q96K17 158 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 SF3B5Q9BWJ5 86 aaKnown RBP10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 C1QTNF9P0C862 333 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 GCH1P30793 250 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 ZNF573Q86YE8 665 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 DLL3Q9NYJ7 618 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 CRIM1Q9NZV1 1036 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 A0A0G2JMM0 328 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 A0A1W2PPB8 328 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 A0A1W2PRS3 328 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 KIR3DP1A8MWS1 328 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 CFIP05156 583 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 GRPP07492 148 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 TPPP2P59282 170 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 HTD2P86397 168 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 CEACAM21Q3KPI0 293 aa10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 APOBEC3DQ96AK3 386 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC9-208ENST00000520857 OR2D2Q9H210 308 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms