RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 B3GALT2O43825 422 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF324O75467 553 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 GJB3O75712 270 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SERF1AO75920 110 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 STC2O76061 302 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SPINK8P0C7L1 97 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF728P0DKX0 622 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ATP1B2P14415 290 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 AREGP15514 252 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 EPORP19235 508 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 CSRP1P21291 193 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 CRYBB3P26998 211 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 GRPRP30550 384 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SNU13P55769 128 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 RPL23P62829 140 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADIGQ0VDE8 80 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 HSPB3Q12988 150 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 LY6DQ14210 128 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM72AQ5TYM5 149 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM72DQ6L9T8 149 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM72BQ86X60 149 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 TEX29Q8N6K0 151 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 LRTM2Q8N967 370 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4A16Q8NH70 328 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 WDR34Q96EX3 536 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 KCNS1Q96KK3 526 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 DUX5Q96PT3 197 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 UHRF2Q96PU4 802 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 GFI1Q99684 422 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 GPA33Q99795 319 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM204Q9BSN7 226 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 EBPLQ9BY08 206 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SMIM3Q9BZL3 60 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 VN1R1Q9GZP7 353 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 WDR61Q9GZS3 305 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 COA1Q9GZY4 146 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 PARP12Q9H0J9 701 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 RAB9BQ9NP90 201 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 PRSS16Q9NQE7 514 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 CD207Q9UJ71 328 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ICAM5Q9UMF0 924 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 HS3ST2Q9Y278 367 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 MED31Q9Y3C7 131 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 PTRH2Q9Y3E5 179 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 LSM5Q9Y4Y9 91 aaKnown RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 PPIAL4AQ9Y536 164 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 TSSC4Q9Y5U2 329 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 HS3ST4Q9Y661 456 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SCN1AP35498 2009 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 RALGAPA2Q2PPJ7 1873 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF106Q9H2Y7 1883 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 HEATR5AQ86XA9 2040 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 NUP205Q92621 2012 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 TRAV8-6A0A0B4J262 113 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 A0A0G2JLM5 398 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CENPVL3A0A0U1RRI6 287 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 KIR2DS1A0A191URI9 304 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM231BA6NCW3 169 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CEBPZOSA8MTT3 80 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 IFNL4K9M1U5 179 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 RER1O15258 196 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 XRCC2O43543 280 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF737O75373 536 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC25A14O95258 325 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 APOA2P02652 100 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 GYPAP02724 150 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 KLKB1P03952 638 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR5AL1P0C617 328 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 HIST1H1EP10412 219 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 HIST1H1CP16403 213 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 IL3RAP26951 378 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 HTR1DP28221 377 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 GPR183P32249 361 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 HRH1P35367 487 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CDKN1AP38936 164 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CA7P43166 264 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SGSHP51688 502 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 UCNP55089 124 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SUMO3P55854 103 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 RPS16P62249 146 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PITX1P78337 314 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC35B1P78383 322 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CCL20P78556 96 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 DUSP2Q05923 314 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SRSF1Q07955 248 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 FUT7Q11130 342 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZP4Q12836 540 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 KLRD1Q13241 179 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 RUNX3Q13761 415 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 KIR2DS1Q14954 304 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PMVKQ15126 192 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 DUSP28Q4G0W2 176 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 C1orf100Q5SVJ3 147 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM166AQ6J272 317 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 RASL11AQ6T310 242 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PCSK4Q6UW60 755 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 DHRS13Q6UX07 377 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM64Q6YI46 380 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms