RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SLC9A3R2Q15599 337 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 DCXRQ7Z4W1 244 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 ZNF565Q8N9K5 539 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR5P3Q8WZ94 311 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 HIST1H2BAQ96A08 127 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 ABHD14BQ96IU4 210 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 ABCG5Q9H222 651 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 HRASLSQ9HDD0 168 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 FIS1Q9Y3D6 152 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGHMP01871 453 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 IL6P05231 212 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 NQO1P15559 274 aaKnown RBP2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 ZNF708P17019 499 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 ORM2P19652 201 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 LYPD6Q86Y78 171 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 EIF4E3Q8N5X7 224 aaKnown RBP2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 GPR32P1Q8NGA4 272 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 OR2V1Q8NHB1 315 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 ERMNQ8TAM6 284 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 RAB8BQ92930 207 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 OTUB2Q96DC9 234 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 TM2D3Q9BRN9 247 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 MED18Q9BUE0 208 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 HES4Q9HCC6 221 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 POLR1DQ9Y2S0 133 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 WASHC3Q9Y3C0 194 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 DSCAML1Q8TD84 2053 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 TOPBP1Q92547 1522 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 CEP170Q5SW79 1584 aa2.83□□□□□ -1.96
HMGB1P47-201ENST00000511281 RIMBP3CA6NJZ7 1639 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 RIMBP3BA6NNM3 1639 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 RIMBP3Q9UFD9 1639 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 TRAV8-1A0A0A6YYK1 113 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 ACOX3O15254 700 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 DEDDO75618 318 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 IFNA5P01569 189 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 IL3P08700 152 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 RPL12P30050 165 aaKnown RBP2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 GABRA3P34903 492 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 AKR1C2P52895 323 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 BSPH1Q075Z2 132 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 LGALSLQ3ZCW2 172 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 JOSD2Q8TAC2 188 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 OPTNQ96CV9 577 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 ASF1BQ9NVP2 202 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 HDGFL3Q9Y3E1 203 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 IFT140Q96RY7 1462 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 ARHGEF11O15085 1522 aa2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 EIF4G3O43432 1585 aaKnown RBP2.82□□□□□ -1.96
HMGB1P47-201ENST00000511281 SMIM23A6NLE4 172 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 EEF1E1O43324 174 aaKnown RBP2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 TGOLN2O43493 480 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 SLC25A20O43772 301 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 STK16O75716 305 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 MYL12AP19105 171 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 AP2S1P53680 142 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 ACTBP60709 375 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 HERVK_113P63121 156 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 ACTG1P63261 375 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 PPP1R1AQ13522 171 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 N4BP2L1Q5TBK1 243 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 LPCAT4Q643R3 524 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 HS3ST5Q8IZT8 346 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 ZNF664Q8N3J9 261 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 TMEM161BQ8NDZ6 487 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 MUC7Q8TAX7 377 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 Q8WTZ3 238 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 RAD51AP1Q96B01 352 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 UPK3BQ9BT76 320 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 PRDM2Q13029 1718 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 ATAD5Q96QE3 1844 aa2.81□□□□□ -1.96
HMGB1P47-201ENST00000511281 TARBP1Q13395 1621 aaKnown RBP2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 DNMBPQ6XZF7 1577 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 POLA1P09884 1462 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 ARAP1Q96P48 1450 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 C5orf49A4QMS7 147 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 K7EQS6 105 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 DCTN3O75935 186 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 CD7P09564 240 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 OR4A8P0C604 315 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 ZNF141Q15928 474 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 SYPL2Q5VXT5 272 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 ATP5L2Q7Z4Y8 100 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 ZNF567Q8N184 647 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 EEF1AKMT1Q8WVE0 214 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 TESCQ96BS2 214 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 CPNE2Q96FN4 548 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 SLC25A44Q96H78 314 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 C3orf18Q9UK00 162 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 DKKL1Q9UK85 242 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 DNAJC12Q9UKB3 198 aa2.8□□□□□ -1.96
HMGB1P47-201ENST00000511281 LINC00862A6NCI5 91 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 M0R036 132 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 PSCAO43653 123 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 COL8A2P25067 703 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 CRABP1P29762 137 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 OR10J1P30954 320 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 DAPP51397 102 aa2.79□□□□□ -1.96
HMGB1P47-201ENST00000511281 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms