RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MOB3BQ86TA1 216 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 LINC00311Q8N616 119 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 OR52M1Q8NGK5 317 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 OR56B4Q8NH76 319 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 AGMATQ9BSE5 352 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 SERTAD4Q9NUC0 356 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 KCNIP1Q9NZI2 227 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 GNG12Q9UBI6 72 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 TRBV6-7A0A0A0MS04 114 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 IGKV1D-13A0A0B4J2D9 117 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 SH2D7A6NKC9 451 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 TRDCB7Z8K6 153 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 M0QZK8 103 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 ZNF701M0R085 212 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 HSD17B6O14756 317 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 ST8SIA5O15466 376 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 FABP7O15540 132 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 YPEL1O60688 119 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 IGLV2-14P01704 120 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 LPLP06858 475 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 SNRNP70P08621 437 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 IGKV1-13P0DP09 117 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 CD28P10747 220 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 TMEM11P17152 192 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 DTYMKP23919 212 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 IL3RAP26951 378 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 OR3A3P47888 321 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 REG1BP48304 166 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 RAB7AP51149 207 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 ZNF137PP52743 207 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 HTD2P86397 168 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 TMEM95Q3KNT9 176 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 RNASE12Q5GAN4 147 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 CNIH2Q6PI25 160 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 Q6ZS46 218 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 ZNF554Q86TJ5 538 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 LYSMD2Q8IV50 215 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 Q8N2B8 174 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 DRAM1Q8N682 238 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 OR5AU1Q8NGC0 362 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 GPX8Q8TED1 209 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 IL1F10Q8WWZ1 152 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 ACOT12Q8WYK0 555 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 R3HDM4Q96D70 268 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 ABHD14BQ96IU4 210 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 RBM14Q96PK6 669 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 YPEL2Q96QA6 119 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 TOLLIPQ9H0E2 274 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 C11orf54Q9H0W9 315 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 CHMP1AQ9HD42 196 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 JPT1Q9UK76 154 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 V9GYH0 126 aa6.97□□□□□ -1.29
PDLIM5-213ENST00000509357 A0A0A6YYH2 397 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 A0A1W2PRX2 142 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 CCDC160A6NGH7 325 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 A6NJ64 397 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 WIPF1O43516 503 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 LANCL1O43813 399 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 NAT1P18440 290 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 TNFSF8P32971 234 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 DGCR2P98153 550 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 ARFRP1Q13795 201 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 ZNF79Q15937 498 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 SRSF7Q16629 238 aaKnown RBP eCLIP6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 PNLIPRP3Q17RR3 467 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 RPL39P5Q59GN2 51 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 KHDC1LQ5JSQ8 128 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 TMEM69Q5SWH9 247 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 ZNF660Q6AZW8 331 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 TRAT1Q6PIZ9 186 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 MOB1BQ7L9L4 216 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 HOGA1Q86XE5 327 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 SNX29P2Q8IUI4 249 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 OR8H3Q8N146 312 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 C8orf31Q8N9H6 132 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 OR52I2Q8NH67 350 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 RITA1Q96K30 269 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 CMTM3Q96MX0 182 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 CITED2Q99967 270 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 OCSTAMPQ9BR26 566 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 ST6GALNAC5Q9BVH7 336 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 RIMS4Q9H426 269 aaPredicted RBP6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 OR2S2Q9NQN1 319 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 EXTL2Q9UBQ6 330 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 SLC23A1Q9UHI7 598 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 MOB4Q9Y3A3 225 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 WNK1Q9H4A3 2382 aa6.96□□□□□ -1.3
PDLIM5-213ENST00000509357 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 SAA2-SAA4A0A096LPE2 208 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 IGHV3-72A0A0B4J1Y9 119 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 TCRBV4S1A1TA0A5B7 111 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 NCBP2LA6PVI3 153 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 BET1O15155 118 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 KCNAB3O43448 404 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 TUSC2O75896 110 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
PDLIM5-213ENST00000509357 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms