RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 BPIFB3P59826 476 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 ROM1Q03395 351 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 HMGN3Q15651 99 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 VAMP3Q15836 100 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 RSPO1Q2MKA7 263 aaPredicted RBP7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 RNF144BQ7Z419 303 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 WDR31Q8NA23 367 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 DMBX1Q8NFW5 382 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 OR52N4Q8NGI2 321 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 OR5B12Q96R08 314 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 RPH3ALQ9UNE2 315 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 SLC17A2O00624 439 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 DLEU1O43261 78 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 SPRY3O43610 288 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 TMEM127O75204 238 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 CD8AP01732 235 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 GZMBP10144 247 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 COL8A1P27658 744 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 SNCAP37840 140 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 HOXA4Q00056 320 aaPredicted RBP7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 BSPH1Q075Z2 132 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 TEX30Q5JUR7 227 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 DEGS2Q6QHC5 323 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 DPPA3Q6W0C5 159 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 SLC25A42Q86VD7 318 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 OR51T1Q8NGJ9 327 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 OR1L6Q8NGR2 347 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 ASB5Q8WWX0 329 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 GP6Q9HCN6 339 aa7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 RBM7Q9Y580 266 aaKnown RBP7.39□□□□□ -1.23
LIMCH1-209ENST00000509277 IGHV1-18A0A0C4DH31 117 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 GRIFINA4D1Z8 144 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 A8MWP6 167 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 SOCS1O15524 211 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 SPRY1O43609 319 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 LILRA1O75019 489 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 KRTDAPP60985 99 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 RAB4BP61018 213 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 TMEM128Q5BJH2 165 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 TEX38Q6PEX7 206 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 CMTM1Q8IZ96 169 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 ABHD5Q8WTS1 349 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 C2orf50Q96LR7 162 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 ZNF835Q9Y2P0 537 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 USP9YO00507 2555 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 DOPEY1Q5JWR5 2465 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 ZNF816-ZNF321PA0A0X1KG74 233 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 HSPB6O14558 160 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 PLAUP00749 431 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 OR5H8P0DN80 308 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 CCKARP32238 428 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 CHRNA7P36544 502 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 SULT1A2P50226 295 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 GPM6AP51674 278 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 MTCP1P56278 107 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 GNMTQ14749 295 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 ELOBQ15370 118 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 ZNF684Q5T5D7 378 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 TMEM108Q6UXF1 575 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 TMEM229BQ8NBD8 167 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 APOBEC3DQ96AK3 386 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 SAT2Q96F10 170 aaPredicted RBP7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 POM121L2Q96KW2 1035 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 LYZL4Q96KX0 146 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 MS4A10Q96PG2 267 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 SLC25A31Q9H0C2 315 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 CNTD2Q9H8S5 307 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
LIMCH1-209ENST00000509277 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 ANKRD30BLA7E2S9 258 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 RPL36A-HNRNPH2H7BZ11 118 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 AMBPP02760 352 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 CD55P08174 381 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 DUSP1P28562 367 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 MPV17P39210 176 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 UCP2P55851 309 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 RND3P61587 244 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 KCNMB1Q16558 191 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 PRSS8Q16651 343 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 GLIPR1L1Q6UWM5 242 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 OR5D14Q8NGL3 314 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 BORCS8Q96FH0 119 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 FKBP11Q9NYL4 201 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 FLNBO75369 2602 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 ABCA1O95477 2261 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 RAB29O14966 203 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 CDC14BO60729 498 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 CD5P06127 495 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 BLVRBP30043 206 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 FAM3BP58499 235 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 NAAAQ02083 359 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 TIMM23BQ5SRD1 257 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 DOK3Q7L591 496 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 OR4C5Q8NGB2 326 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 TVP23CQ96ET8 276 aa7.37□□□□□ -1.23
LIMCH1-209ENST00000509277 ATP5SQ99766 215 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms