RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MRPL30Q8TCC3 161 aaKnown RBP9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 RAB39BQ96DA2 213 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 MAGT1Q9H0U3 335 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF71Q9NQZ8 489 aaPredicted RBP9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 TMEM242Q9NWH2 141 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 ZFYVE26Q68DK2 2539 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 ESPL1Q14674 2120 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 HSPB6O14558 160 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 ASCL1P50553 236 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 GNG3P63215 75 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 CCL20P78556 96 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 HLA-DRB3P79483 266 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 SERF2P84101 59 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 ICAM4Q14773 271 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF324BQ6AW86 544 aaPredicted RBP9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 SLC25A24Q6NUK1 477 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 PCSK4Q6UW60 755 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 C1orf162Q8NEQ5 155 aaPredicted RBP9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 SLC25A40Q8TBP6 338 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 P2RX4Q99571 388 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 PARD6GQ9BYG4 376 aaPredicted RBP9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 IGKV1D-13A0A0B4J2D9 117 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 J3QW42 95 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 RHBDL1O75783 438 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 CST7O76096 145 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 CRYABP02511 175 aaKnown RBP9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 CECR9P0C854 216 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 IGKV1-13P0DP09 117 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 CBR1P16152 277 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 HOXA5P20719 270 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 MPV17P39210 176 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 GLIPR1P48060 266 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 PAX9P55771 341 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 HBG1P69891 147 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 HBG2P69892 147 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 PSG7Q13046 419 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 PMS2P11Q13670 270 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 FAM180AQ6UWF9 173 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 WDR86Q86TI4 376 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 LURAP1LQ8IV03 231 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 Q8IYB0 196 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 FAM58AQ8N1B3 248 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 C17orf78Q8N4C9 275 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 MBD3L1Q8WWY6 194 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 PRORYQ9H606 182 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 GSN-AS1Q9NRJ2 163 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 CISD1Q9NZ45 108 aaKnown RBP9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 TAAR3PQ9P1P4 343 aa9.3□□□□□ -0.92
SH3RF1-203ENST00000508685 IGKV1-6A0A0C4DH72 117 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 LOC102723971A0A1B0GUV8 181 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 A0A1W2PPE3 182 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 NDUFS6O75380 124 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 TMEM50AO95807 157 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 NQO2P16083 231 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 SELEP16581 610 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 OR2B8PP59922 312 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 DLK1P80370 383 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 KIAA0141Q14154 515 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 HAGHQ16775 308 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 ALKBH2Q6NS38 261 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 RBMS3Q6XE24 437 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 OR10V1Q8NGI7 309 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 RNASE11Q8TAA1 199 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 KLF14Q8TD94 323 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 PINX1Q96BK5 328 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 GPR146Q96CH1 333 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 TOLLIPQ9H0E2 274 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 A0A1B0GV50 99 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 RNF212BA8MTL3 300 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 FAM90A26D6RGX4 464 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 K7ENP7 123 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 IFNA1P01562 189 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF154Q13106 437 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 P2RY6Q15077 328 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 C1orf185Q5T7R7 199 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF474Q6S9Z5 364 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 BHLHA15Q7RTS1 189 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 SLC16A13Q7RTY0 426 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 TMEM217Q8N7C4 229 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 Q8NA96 180 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 ABHD14AQ9BUJ0 271 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 OR51I2Q9H344 312 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 LIN7CQ9NUP9 197 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 FZR1Q9UM11 496 aa9.29□□□□□ -0.92
SH3RF1-203ENST00000508685 IGHV1-18A0A0C4DH31 117 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 OR5H1A6NKK0 313 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 KIAA1324LA8MWY0 1029 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 H0YL77 283 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 SYNGR2O43760 224 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 CLN5O75503 358 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 RAC2P15153 192 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 CD81P60033 236 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 ELOBQ15370 118 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 TBR1Q16650 682 aa9.28□□□□□ -0.92
SH3RF1-203ENST00000508685 BEND4Q6ZU67 534 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms