RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 RAMP2O60895 175 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 WNT4P56705 351 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ERCC8Q13216 396 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 GUCA2BQ16661 112 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 WDR59Q6PJI9 974 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 MPLKIPQ8TAP9 179 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 SFT2D1Q8WV19 159 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ARL11Q969Q4 196 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 HES4Q9HCC6 221 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 WDR97A6NE52 1622 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF318Q5VUA4 2279 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 HLA-DRB1P01911 266 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
NIPBL-204ENST00000504430 LINC00694P0DN24 101 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 MDH2P40926 338 aaKnown RBP3.96□□□□□ -1.78
NIPBL-204ENST00000504430 FAAP20Q6NZ36 180 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF493Q6ZR52 646 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF524Q96C55 264 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 C1QTNF4Q9BXJ3 329 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF696Q9H7X3 374 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 DHRS4-AS1Q9P1J3 65 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 TDRD6O60522 2096 aaKnown RBP3.96□□□□□ -1.78
NIPBL-204ENST00000504430 PLXND1Q9Y4D7 1925 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 NDUFC2-KCTD14E9PQ53 114 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 M0R2Z0 102 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 PPP1R3DO95685 299 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 GADD45AP24522 165 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 CASP1P29466 404 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 Q5XG85 94 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 PCSK4Q6UW60 755 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 TEX43Q6ZNM6 134 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 C17orf82Q86X59 251 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-204ENST00000504430 DRAM1Q8N682 238 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ZDHHC22Q8N966 263 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 OR4C6Q8NH72 309 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 OR1L1Q8NH94 360 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 KCNS1Q96KK3 526 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 PPP3R2Q96LZ3 170 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 TSSK6Q9BXA6 273 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 NKX6-2Q9C056 277 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-204ENST00000504430 C11orf68Q9H3H3 251 aaKnown RBP3.96□□□□□ -1.78
NIPBL-204ENST00000504430 PDFQ9HBH1 243 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 CA10Q9NS85 328 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 HEBP2Q9Y5Z4 205 aa3.96□□□□□ -1.78
NIPBL-204ENST00000504430 ABCC12Q96J65 1359 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 FOCADQ5VW36 1801 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 PPIP5K1Q6PFW1 1433 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 DHRS12A0PJE2 317 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 RIIAD1A6NNX1 92 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 DEFB128Q7Z7B8 93 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 BAP18Q8IXM2 172 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 OR2M4Q96R27 311 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 OR7D2Q96RA2 312 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 GTSF1LQ9H1H1 148 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 PCTPQ9UKL6 214 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 PCNX3Q9H6A9 2034 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 CCL15-CCL14A0A0B4J2E2 113 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 C5orf49A4QMS7 147 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 UPK1BO75841 260 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 SOD3P08294 240 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 FKBP2P26885 142 aaKnown RBP3.95□□□□□ -1.78
NIPBL-204ENST00000504430 TNFAIP6P98066 277 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-204ENST00000504430 CCL15Q16663 113 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 ZNF404Q494X3 552 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 C20orf196Q8IYI0 205 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 LINC00471Q8N535 108 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 NTN5Q8WTR8 489 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-204ENST00000504430 CT55Q8WUE5 264 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 GALNT14Q96FL9 552 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 MRPL20Q9BYC9 149 aaKnown RBP3.95□□□□□ -1.78
NIPBL-204ENST00000504430 NUFIP1Q9UHK0 495 aaKnown RBP3.95□□□□□ -1.78
NIPBL-204ENST00000504430 MED31Q9Y3C7 131 aa3.95□□□□□ -1.78
NIPBL-204ENST00000504430 DENND4BO75064 1496 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-204ENST00000504430 A0A087WW49 117 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 IGHV3OR16-9A0A0B4J2B5 98 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 M0R1X1 148 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 MRPL3P09001 348 aaKnown RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 ZSCAN5DPP0CG00 497 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SLC25A1P53007 311 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 RPS25P62851 125 aaKnown RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 COL10A1Q03692 680 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 MMDQ15546 238 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 VN1R4Q7Z5H5 301 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 TMEM229BQ8NBD8 167 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 OR4E2Q8NGC2 313 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SAMD10Q9BYL1 202 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 RARRES3Q9UL19 164 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 HES2Q9Y543 173 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 A0A0B4J2A0 478 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 HLA-DQB2P05538 268 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 FGF7P21781 194 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 CNTFRP26992 372 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 RBM11P57052 281 aaKnown RBP3.94□□□□□ -1.78
NIPBL-204ENST00000504430 LINC00313P59037 77 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 BIKQ13323 160 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 SHISA6Q6ZSJ9 500 aa3.94□□□□□ -1.78
NIPBL-204ENST00000504430 ADAT1Q9BUB4 502 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms