RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 CD34P28906 385 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 VHLP40337 213 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 FHITP49789 147 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 NKX2-5P52952 324 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 CDC42P60953 191 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 PNLIPRP3Q17RR3 467 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 PAN3Q58A45 887 aaKnown RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 C9orf66Q5T8R8 295 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 TMEM244Q5VVB8 128 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 PYHIN1Q6K0P9 492 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 CCDC144NLQ6NUI1 221 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 FAHD1Q6P587 224 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 CCDC197Q8NCU1 140 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 DNAAF1Q8NEP3 725 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 OR4D10Q8NGI6 311 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 OR51A4Q8NGJ6 313 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 OR5M8Q8NGP6 311 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 OR10X1Q8NGY0 326 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 RNASE11Q8TAA1 199 aaKnown RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 PLPPR1Q8TBJ4 325 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 PP6455Q8WZ26 134 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 CREB3L1Q96BA8 519 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 C16orf92Q96LL3 132 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 ALX4Q9H161 411 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 SLA2Q9H6Q3 261 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 ZFP57Q9NU63 452 aa4.3□□□□□ -1.72
SPTA1-209ENST00000498708 WARS2Q9UGM6 360 aaKnown RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF256Q9Y2P7 627 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 AMMECR1Q9Y4X0 333 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-209ENST00000498708 TCRBV3S1A0A5B6 114 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 DAPL1A0PJW8 107 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 RAB19A4D1S5 217 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 OOSP1A8MZH6 123 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF736B4DX44 427 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-209ENST00000498708 G3V2T6 193 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 CCRL2O00421 344 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 GYG2O15488 501 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 FGF16O43320 207 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 DEDDO75618 318 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 SULT1C4O75897 302 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 CCNKO75909 580 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 IL1AP01583 271 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 IGHG2P01859 326 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 FABP1P07148 127 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 S100PP25815 95 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 C21orf33P30042 268 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-209ENST00000498708 HTR1FP30939 366 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 SSTR5P35346 364 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 GPR12P47775 334 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 TAS2R60P59551 318 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 VAMP2P63027 116 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 EFNB1P98172 346 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 MADCAM1Q13477 382 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 GPR50Q13585 617 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 SMCO1Q147U7 214 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 CDK5R1Q15078 307 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 KCTD21Q4G0X4 260 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 KIAA2026Q5HYC2 2103 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 CXorf66Q5JRM2 361 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-209ENST00000498708 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 CCDC54Q8NEL0 328 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 OR11H1Q8NG94 326 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 OR2G2Q8NGZ5 317 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 OR8U1Q8NH10 309 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 CCDC107Q8WV48 283 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 SPSB1Q96BD6 273 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 RNFT2Q96EX2 444 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF486Q96H40 463 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-209ENST00000498708 GPER1Q99527 375 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 RASL11BQ9BPW5 248 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 HSPB9Q9BQS6 159 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF251Q9BRH9 671 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 SEC22CQ9BRL7 303 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 COMMD4Q9H0A8 199 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 SEBOXQ9HB31 216 aaPredicted RBP4.29□□□□□ -1.72
SPTA1-209ENST00000498708 OR6C3Q9NZP0 311 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF581Q9P0T4 197 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 ING4Q9UNL4 249 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 POMPQ9Y244 141 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 PUS1Q9Y606 427 aaKnown RBP eCLIP4.29□□□□□ -1.72
SPTA1-209ENST00000498708 DSCAML1Q8TD84 2053 aa4.29□□□□□ -1.72
SPTA1-209ENST00000498708 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 TRAV24A0A0B4J272 114 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 IGHV1-3A0A0C4DH29 117 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 A0A1W2PN81 502 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 SAC3D1A6NKF1 404 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 AP4M1O00189 453 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 GABRPO00591 440 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 UBE2CO00762 179 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 TSPAN4O14817 238 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 SLC31A2O15432 143 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 MBP02144 154 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 APOA1P02647 267 aa4.28□□□□□ -1.72
SPTA1-209ENST00000498708 GAPDHP04406 335 aaKnown RBP4.28□□□□□ -1.72
SPTA1-209ENST00000498708 GNAO1P09471 354 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms