RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GNMTQ14749 295 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF66Q6ZN08 573 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 SLC51BQ86UW2 128 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 ZNRF1Q8ND25 227 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 OR8U1Q8NH10 309 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 OR1L1Q8NH94 360 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 RNASE11Q8TAA1 199 aaKnown RBP8.54□□□□□ -1.04
HDAC3-214ENST00000495485 CD300LFQ8TDQ1 290 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 IGFBPL1Q8WX77 278 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DCUN1D4Q92564 292 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 CCL17Q92583 94 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 CORO2AQ92828 525 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 MSI2Q96DH6 328 aaKnown RBP8.54□□□□□ -1.04
HDAC3-214ENST00000495485 CYYR1Q96J86 154 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 C18orf12Q96KH6 178 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 YPEL2Q96QA6 119 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 FOXC2Q99958 501 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 GAL3ST2Q9H3Q3 398 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 PLEKHA2Q9HB19 425 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 TAS2R3Q9NYW6 316 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 OR1A1Q9P1Q5 309 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 DUX4Q9UBX2 424 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 UBQLN2Q9UHD9 624 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 TNFSF18Q9UNG2 199 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 BOLA1Q9Y3E2 137 aa8.54□□□□□ -1.04
HDAC3-214ENST00000495485 TRAV39A0A0B4J263 110 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 IGKV1D-13A0A0B4J2D9 117 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 G3V3Q6 166 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 TAAR5O14804 337 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 ZNF205O95201 554 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 GYPAP02724 150 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 IGKV1-13P0DP09 117 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 SLC25A6P12236 298 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 LYL1P12980 280 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 S100A10P60903 97 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 UBA52P62987 128 aaKnown RBP8.53□□□□□ -1.04
HDAC3-214ENST00000495485 SWI5Q1ZZU3 235 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 SP6Q3SY56 376 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 Q5BKY6 102 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 TEX261Q6UWH6 196 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 DEFB108BQ8NET1 73 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 OR13A1Q8NGR1 328 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 NEU4Q8WWR8 484 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-214ENST00000495485 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 HSD17B10Q99714 261 aaKnown RBP8.53□□□□□ -1.04
HDAC3-214ENST00000495485 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 CACFD1Q9UGQ2 172 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 U3KQ87 197 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 TLN2Q9Y4G6 2542 aa8.53□□□□□ -1.04
HDAC3-214ENST00000495485 TANC2Q9HCD6 1990 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 TRAV14DV4A0A0A6YYC5 116 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 KBTBD11-OT1A0A1B0GTJ5 212 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 A0A1B0GU03 582 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 A0A1W2PPR1 153 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 E5RGE8 158 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 OVOL3O00110 214 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 F2RL2O00254 374 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 WRBO00258 174 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 GPR37O15354 613 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 TMPRSS2O15393 492 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 ST8SIA3O43173 380 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 PLAUP00749 431 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 ZNF16P17020 682 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 NDUFB7P17568 137 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 CXCL2P19875 107 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 KIR2DS2P43631 304 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 MRPS11P82912 194 aaKnown RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 DEFB113Q30KQ7 82 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 FAM219AQ8IW50 185 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 SLC35G3Q8N808 338 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 LSM10Q969L4 123 aaKnown RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 RRNAD1Q96FB5 475 aaKnown RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 TIMD4Q96H15 378 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 OR10C1Q96KK4 312 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 CCL13Q99616 98 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 ARPC5LQ9BPX5 153 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 OR2D2Q9H210 308 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 CALYQ9NYX4 217 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 MBD2Q9UBB5 411 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 KAAG1Q9UBP8 84 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 SLC25A10Q9UBX3 287 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-214ENST00000495485 CLN8Q9UBY8 286 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 GAB2Q9UQC2 676 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 NSG2Q9Y328 171 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 LINC00312Q9Y6C7 94 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 F8P00451 2351 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 ACANP16112 2415 aa8.52□□□□□ -1.05
HDAC3-214ENST00000495485 MTORP42345 2549 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms