RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SAA2-SAA4A0A096LPE2 208 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 TCRBV4S1A1TA0A5B7 111 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 PSMB11A5LHX3 300 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 SH2D7A6NKC9 451 aaPredicted RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 ZNF736B4DX44 427 aaPredicted RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 MFNGO00587 321 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 ST8SIA5O15466 376 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 FABP7O15540 132 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 IGHG2P01859 326 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OPN1MWP04001 364 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 FCGR3AP08637 254 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 GSTP1P09211 210 aaKnown RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 CTXN2P0C2S0 81 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 CLEC2LP0C7M8 214 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 GSTT2P0CG29 244 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 GSTT2BP0CG30 244 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 SAA2P0DJI9 122 aaPredicted RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OPN1MW2P0DN77 364 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OPN1MW3P0DN78 364 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 MC5RP33032 325 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OR3A3P47888 321 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 SLC35B1P78383 322 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 PITPNAQ00169 270 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 LSAMPQ13449 338 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 NSUN5P1Q3KNT7 163 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 HACD4Q5VWC8 232 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 SLC35E3Q7Z769 313 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 NDUFA11Q86Y39 141 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 Q8N6K4 173 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OR4X2Q8NGF9 303 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OR10J5Q8NHC4 309 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 WIPF2Q8TF74 440 aaPredicted RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 CHPT1Q8WUD6 406 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 YIPF6Q96EC8 236 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 NABP2Q9BQ15 211 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 ZNF251Q9BRH9 671 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 AGMATQ9BSE5 352 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 GON7Q9BXV9 100 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 C11orf54Q9H0W9 315 aaPredicted RBP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 ABCG5Q9H222 651 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 DCSTAMPQ9H295 470 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 IFI27L2Q9H2X8 130 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.54□□□□□ -1.52
TOP3A-207ENST00000493648 DIABLOQ9NR28 239 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 PLSCR3Q9NRY6 295 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 RDH8Q9NYR8 311 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 OR1A1Q9P1Q5 309 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 ETV7Q9Y603 341 aa5.54□□□□□ -1.52
TOP3A-207ENST00000493648 TRBV6-7A0A0A0MS04 114 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 OR5H14A6NHG9 310 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 TRIM64CA6NLI5 447 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 AP4M1O00189 453 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 BET1O15155 118 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 KCNAB3O43448 404 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 DIRAS3O95661 229 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 TSPAN15O95858 294 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 CT45A6P0DMU7 189 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 CT45A5P0DMU8 189 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 CT45A7P0DMV0 189 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 DTYMKP23919 212 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 SOX6P35712 828 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 GPR12P47775 334 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 F2RL1P55085 397 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 GNG2P59768 71 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 ACTBP60709 375 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 LSM3P62310 102 aaKnown RBP5.53□□□□□ -1.52
TOP3A-207ENST00000493648 CD83Q01151 205 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 MMDQ15546 238 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 PNLIPRP3Q17RR3 467 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 RPL39P5Q59GN2 51 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 IGSF11Q5DX21 431 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 Q6ZS49 121 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 Q8N9W7 124 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 OR4F17Q8NGA8 305 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 LGALS14Q8TCE9 139 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 S100A16Q96FQ6 103 aaKnown RBP5.53□□□□□ -1.52
TOP3A-207ENST00000493648 ABHD14BQ96IU4 210 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 OR4F4Q96R69 305 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 GINS4Q9BRT9 223 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 ST6GALNAC5Q9BVH7 336 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 MRPL20Q9BYC9 149 aaKnown RBP5.53□□□□□ -1.52
TOP3A-207ENST00000493648 TOLLIPQ9H0E2 274 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 RHBDL2Q9NX52 303 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 KIAA1456Q9P272 454 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 ZNF230Q9UIE0 474 aaPredicted RBP5.53□□□□□ -1.52
TOP3A-207ENST00000493648 RNF150Q9ULK6 438 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 SPATA2Q9UM82 520 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 GAB2Q9UQC2 676 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 RBM7Q9Y580 266 aaKnown RBP5.53□□□□□ -1.52
TOP3A-207ENST00000493648 TSSC4Q9Y5U2 329 aaPredicted RBP5.53□□□□□ -1.52
TOP3A-207ENST00000493648 FBN3Q75N90 2809 aa5.53□□□□□ -1.52
TOP3A-207ENST00000493648 TRAV18A0A075B6X5 111 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 A0A0A6YYH2 397 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 IGKV1-6A0A0C4DH72 117 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 A6NJ64 397 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 H7C2Y5 167 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 NBR2O15453 112 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 RBBP9O75884 186 aa5.52□□□□□ -1.53
TOP3A-207ENST00000493648 OR8U9P0C7N5 309 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms