RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 SLC35B1P78383 322 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 KIAA0141Q14154 515 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 KIR2DS1Q14954 304 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 SSX1Q16384 188 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 HSD17B12Q53GQ0 312 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 GPR107Q5VW38 600 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 C18orf65Q6ZTR6 163 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 C6orf201Q7Z4U5 140 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 ANKRD13BQ86YJ7 626 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 CLVS1Q8IUQ0 354 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 ZNF695Q8IW36 515 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 NPBQ8NG41 125 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 OR51D1Q8NGF3 324 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 OR10V1Q8NGI7 309 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 MRAPQ8TCY5 172 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 GALMQ96C23 342 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 RBMXL1Q96E39 390 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 RITA1Q96K30 269 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 NEDD4LQ96PU5 975 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 NABP2Q9BQ15 211 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 HSPB9Q9BQS6 159 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 AGMATQ9BSE5 352 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 TMED9Q9BVK6 235 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 FUNDC2Q9BWH2 189 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 LPAR5Q9H1C0 372 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 RIMS4Q9H426 269 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 LINC00527Q9UJ94 153 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 HSF4Q9ULV5 492 aa7.62□□□□□ -1.19
TMEM39A-210ENST00000490099 TRDV1A0A1B0GX56 115 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 DPPA5A6NC42 116 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 SLC17A2O00624 439 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 AIREO43918 545 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 ARL6IP5O75915 188 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 GABARAPO95166 117 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 GADD45AP24522 165 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 PSMB8P28062 276 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 BLVRBP30043 206 aaPredicted RBP7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 SOX6P35712 828 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 PPP1CCP36873 323 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 TMEM50BP56557 158 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 RPS25P62851 125 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 C19orf54Q5BKX5 351 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 FAM71F2Q6NXP2 309 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 CD200R1LQ6Q8B3 271 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 C8orf86Q6ZUL3 223 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 PRR18Q8N4B5 295 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 TMEM203Q969S6 136 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 PTX4Q96A99 478 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 RAX2Q96IS3 184 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 NICN1Q9BSH3 213 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 ABHD14AQ9BUJ0 271 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 MCRIP2Q9BUT9 160 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 TMEM59Q9BXS4 323 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 GPR61Q9BZJ8 451 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 IFI27L2Q9H2X8 130 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 GHITMQ9H3K2 345 aa7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 RSL24D1Q9UHA3 163 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-210ENST00000490099 LOC100506127A0A0U1RQW1 187 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 WI2-2373I1.2A0A1W2PRP0 233 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 CCL24O00175 119 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 SOCS1O15524 211 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 PROP1O75360 226 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 RGS11O94810 467 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 NDUFA3O95167 84 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 IGLV1-40P01703 118 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 HLA-DRB1P01911 266 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 RPLP1P05386 114 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 FGF9P31371 208 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 OR3A3P47888 321 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 ACTBP60709 375 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 FABP5Q01469 135 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 DGCR14Q96DF8 476 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 KCTD7Q96MP8 289 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 RASL11BQ9BPW5 248 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 MRPL20Q9BYC9 149 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 KCNK15Q9H427 330 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 SLC23A1Q9UHI7 598 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 ZNF107Q9UII5 783 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 CEPT1Q9Y6K0 416 aa7.6□□□□□ -1.19
TMEM39A-210ENST00000490099 SAA2-SAA4A0A096LPE2 208 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 IGHV7-81A0A0B4J1V7 117 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 A6NHS1 94 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 RAB29O14966 203 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 SAA2P0DJI9 122 aaPredicted RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 CT45A6P0DMU7 189 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 CT45A5P0DMU8 189 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 CT45A7P0DMV0 189 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 OR5H8P0DN80 308 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 MYL9P24844 172 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 PSMD7P51665 324 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 CRIP2P52943 208 aaPredicted RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 RUNX1Q01196 453 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 FHL3Q13643 280 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 C5orf64Q2M2E5 130 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 CXorf66Q5JRM2 361 aaPredicted RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 KHDC1LQ5JSQ8 128 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 MOB1BQ7L9L4 216 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 MINDY2Q8NBR6 621 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms