RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 DUXBA0A1W2PPF3 345 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 A0A1W2PRS3 328 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 ZNF850A8MQ14 1090 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 F5H5K5 113 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 GOSR1O95249 250 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 MPLP40238 635 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 GUCA1AP43080 201 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 RRADP55042 308 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 MEF2BQ02080 365 aaPredicted RBP9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 SNAI3Q3KNW1 292 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 NABP1Q96AH0 204 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 TMEM56-RWDD3S4R434 201 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 OR5B21A6NL26 309 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 ARR3P36575 388 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 RHOGP84095 191 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 OR10G3Q8NGC4 313 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 TMEM54Q969K7 222 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 ZDHHC11Q9H8X9 412 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 SLC35D1Q9NTN3 355 aa9.88□□□□□ -0.83
SEC61A1-205ENST00000483956 ODAMA1E959 279 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 H3BP45 60 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 K7ERU9 68 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 M0R135 149 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 IFNA1P01562 189 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 WNT2P09544 360 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 OPRM1P35372 400 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 PPP1CBP62140 327 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 ASCL4Q6XD76 172 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 FADS6Q8N9I5 356 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 OR56B2PQ8NGI1 322 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 ZNF799Q96GE5 643 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 OR6C6A6NF89 314 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 TMEM144Q7Z5S9 345 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 MRPL30Q8TCC3 161 aaKnown RBP9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 ZNF286AQ9HBT8 521 aa9.87□□□□□ -0.83
SEC61A1-205ENST00000483956 HMGB3O15347 200 aaKnown RBP9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 LHX2P50458 406 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 OR4A47Q6IF82 309 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 WDR74Q6RFH5 385 aaPredicted RBP9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 BAGE3Q86Y29 109 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 BAGE2Q86Y30 109 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 CCDC71LQ8N9Z2 235 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 WNT10AQ9GZT5 417 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 ASXL3Q9C0F0 2248 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 SAP30O75446 220 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 IFNA5P01569 189 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 CTXN2P0C2S0 81 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 ESDP10768 282 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 CRISP2P16562 243 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 CLDN18P56856 261 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 NXPH1P58417 271 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 SRPXP78539 464 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 PRAMEF20Q5VT98 475 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 ATOH7Q8N100 152 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 SPTSSAQ969W0 71 aa9.86□□□□□ -0.83
SEC61A1-205ENST00000483956 IGHV1-69-2A0A0G2JMI3 117 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 RNF212BA8MTL3 300 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 CHST1O43916 411 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ZFAND5O76080 213 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 DKK1O94907 266 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 TIAF1O95411 115 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 BAXQ07812 192 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 OR8B8Q15620 311 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 PHYHD1Q5SRE7 291 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 FAM69BQ5VUD6 431 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 SIGLECL1Q8N7X8 197 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 GATAD1Q8WUU5 269 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ABHD14BQ96IU4 210 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ZNF586Q9NXT0 402 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 MRPS16Q9Y3D3 137 aaKnown RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 UNC13CQ8NB66 2214 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 SHANK1Q9Y566 2161 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 HS3ST1O14792 307 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ADAM20O43506 726 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 PIAS2O75928 621 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 CBLN1P23435 193 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 MDH2P40926 338 aaKnown RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 TMEM267Q0VDI3 215 aaPredicted RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 CNN3Q15417 329 aaKnown RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 SMIM21Q3B7S5 101 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 DEFB119Q8N690 84 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 TSTD1Q8NFU3 115 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 OR4F5Q8NH21 305 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 UHRF2Q96PU4 802 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 OR4F4Q96R69 305 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 IL36GQ9NZH8 169 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 PTRH2Q9Y3E5 179 aaKnown RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 IGKV1-27A0A075B6S5 117 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 IGLC7A0M8Q6 106 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ZNF891A8MT65 544 aaPredicted RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 NPIPA2E9PIF3 369 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ANGPTL7O43827 346 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 GLB1P16278 677 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 NHLH1Q02575 133 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ZNF468Q5VIY5 522 aaPredicted RBP9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 ST6GALNAC3Q8NDV1 305 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 LHX4Q969G2 390 aa9.85□□□□□ -0.83
SEC61A1-205ENST00000483956 SPACA9Q96E40 222 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms