RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TRAV38-1A0A0B4J264 116 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 GYPAP02724 150 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 SLC25A6P12236 298 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 ZNF25P17030 456 aaPredicted RBP10.83□□□□□ -0.68
VPS52-218ENST00000482399 WNT5AP41221 380 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 FOXO1Q12778 655 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 OR8B8Q15620 311 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 FGFRL1Q8N441 504 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 OR5D13Q8NGL4 314 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 WDFY4Q6ZS81 3184 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 MPLP40238 635 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 PAX9P55771 341 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 PAX5Q02548 391 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 ZNF664Q8N3J9 261 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 MS4A10Q96PG2 267 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 TMEM9BQ9NQ34 198 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 IGHV1-45A0A0A0MS14 117 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 EPHA8P29322 1005 aaPredicted RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 ABHD17BQ5VST6 288 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 H2BFWTQ7Z2G1 175 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 BAGE3Q86Y29 109 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 BAGE2Q86Y30 109 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 APOBEC3DQ96AK3 386 aaPredicted RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 ACTR3CQ9C0K3 210 aaPredicted RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 HEYLQ9NQ87 328 aaPredicted RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 LIN7CQ9NUP9 197 aaKnown RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 CISD1Q9NZ45 108 aaKnown RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 PAM16Q9Y3D7 125 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 HEATR1Q9H583 2144 aaKnown RBP10.82□□□□□ -0.68
VPS52-218ENST00000482399 COX5AP20674 150 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 GNG3P63215 75 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 SLC10A1Q14973 349 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 MSMO1Q15800 293 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 ZNF573Q86YE8 665 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 TMEM183AQ8IXX5 376 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 ZNF525Q8N782 197 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 RAB24Q969Q5 203 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 ZDHHC11Q9H8X9 412 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 DECR2Q9NUI1 292 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 DLL3Q9NYJ7 618 aa10.82□□□□□ -0.68
VPS52-218ENST00000482399 MDFIC2A0A1B0GVS7 189 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 NDUFB4O95168 129 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 COX6A1P12074 109 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 SRD5A2P31213 254 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 SLC35B1P78383 322 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 ZNF726P1Q15940 193 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 GCSAMLQ5JQS6 135 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 TCF23Q7RTU1 214 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 RPP25LQ8N5L8 163 aaKnown RBP10.81□□□□□ -0.68
VPS52-218ENST00000482399 MRGPRDQ8TDS7 321 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 TMEM131Q92545 1883 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 ZG16O60844 167 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 UMODP07911 640 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 OR4A8P0C604 315 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 GZMBP10144 247 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 TFF3Q07654 80 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 CARFQ8N187 725 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 PINX1Q96BK5 328 aaKnown RBP10.81□□□□□ -0.68
VPS52-218ENST00000482399 PHF7Q9BWX1 381 aaPredicted RBP10.81□□□□□ -0.68
VPS52-218ENST00000482399 DEFB127Q9H1M4 99 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 SERTAD4Q9NUC0 356 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 FKBP11Q9NYL4 201 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
VPS52-218ENST00000482399 UCP2P55851 309 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 RPL23P62829 140 aaKnown RBP10.81□□□□□ -0.68
VPS52-218ENST00000482399 ZNF90Q03938 601 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 CEACAM21Q3KPI0 293 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 GCNT2Q8N0V5 402 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 SSMEM1Q8WWF3 244 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 GTF3AQ92664 365 aaKnown RBP10.81□□□□□ -0.68
VPS52-218ENST00000482399 ABHD14BQ96IU4 210 aa10.81□□□□□ -0.68
VPS52-218ENST00000482399 RAMP3O60896 148 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 IGLV3-1P01715 115 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 KITLGP21583 273 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 PPP1CBP62140 327 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 ARG2P78540 354 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 ZNF826PQ6ZT77 177 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 SGMS2Q8NHU3 365 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 SF3B5Q9BWJ5 86 aaKnown RBP10.8□□□□□ -0.68
VPS52-218ENST00000482399 WDR61Q9GZS3 305 aaKnown RBP10.8□□□□□ -0.68
VPS52-218ENST00000482399 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
VPS52-218ENST00000482399 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 ACTL6BO94805 426 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 GNB2P62879 340 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 HIST1H3AP68431 136 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 AESQ08117 197 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 ZNF124Q15973 351 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 OR52L2PQ8NGH6 319 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 NEIL1Q96FI4 390 aaPredicted RBP10.8□□□□□ -0.68
VPS52-218ENST00000482399 IMMP2LQ96T52 175 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 SRD5A3Q9H8P0 318 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 CDH20Q9HBT6 801 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 GNG12Q9UBI6 72 aa10.8□□□□□ -0.68
VPS52-218ENST00000482399 IGLV3-32A0A0A0MS00 114 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 EREGO14944 169 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 TAS2R60P59551 318 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms