RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 HOGA1Q86XE5 327 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 ODF3L1Q8IXM7 274 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 DRAM1Q8N682 238 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 BEST4Q8NFU0 473 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 OR4F5Q8NH21 305 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 OR56B4Q8NH76 319 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 CAPSLQ8WWF8 208 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 CFHR4Q92496 578 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 AKR1E2Q96JD6 320 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 S1PR3Q99500 378 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 GINS4Q9BRT9 223 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 C11orf54Q9H0W9 315 aaPredicted RBP8.69□□□□□ -1.02
ATG4B-219ENST00000479941 RBM38Q9H0Z9 239 aaKnown RBP8.69□□□□□ -1.02
ATG4B-219ENST00000479941 RDH8Q9NYR8 311 aa8.69□□□□□ -1.02
ATG4B-219ENST00000479941 RSL24D1Q9UHA3 163 aaKnown RBP8.69□□□□□ -1.02
ATG4B-219ENST00000479941 SAA2-SAA4A0A096LPE2 208 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 RGS5O15539 181 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 CHST1O43916 411 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 TSPAN9O75954 239 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 OR2F2O95006 317 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 HLA-DQB1P01920 261 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 SNRNP70P08621 437 aaKnown RBP8.68□□□□□ -1.02
ATG4B-219ENST00000479941 SAA2P0DJI9 122 aaPredicted RBP8.68□□□□□ -1.02
ATG4B-219ENST00000479941 PTHLHP12272 177 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 CD24P25063 80 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 CD1BP29016 333 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 RAG2P55895 527 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 RELBQ01201 579 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 EBI3Q14213 229 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 Q6ZSV7 163 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 ZNF833PQ6ZTB9 187 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 TMEM219Q86XT9 240 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 GVQW1Q8N7I0 195 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 C15orf40Q8WUR7 153 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 NPFFR1Q9GZQ6 430 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 SLIRPQ9GZT3 109 aaKnown RBP8.68□□□□□ -1.02
ATG4B-219ENST00000479941 PARP12Q9H0J9 701 aaKnown RBP8.68□□□□□ -1.02
ATG4B-219ENST00000479941 RANBP3Q9H6Z4 567 aaPredicted RBP8.68□□□□□ -1.02
ATG4B-219ENST00000479941 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 BEX1Q9HBH7 125 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 NDUFA13Q9P0J0 144 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 ADAM30Q9UKF2 790 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 MRPS7Q9Y2R9 242 aaKnown RBP8.68□□□□□ -1.02
ATG4B-219ENST00000479941 MMP24Q9Y5R2 645 aa8.68□□□□□ -1.02
ATG4B-219ENST00000479941 M0QZK8 103 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 SULT1C2O00338 296 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 CTDSP2O14595 271 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 IGKV1D-33P01593 117 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 IGKV1-33P01594 117 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 GPR12P47775 334 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 OR3A3P47888 321 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 ARPC4P59998 168 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 HES1Q14469 280 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 AWAT1Q58HT5 328 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 H1FOOQ8IZA3 346 aaPredicted RBP8.67□□□□□ -1.02
ATG4B-219ENST00000479941 OR4C13Q8NGP0 309 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 OR2T10Q8NGZ9 312 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 TAF15Q92804 592 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATG4B-219ENST00000479941 ABHD14BQ96IU4 210 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 RBM14Q96PK6 669 aaKnown RBP8.67□□□□□ -1.02
ATG4B-219ENST00000479941 ZNF251Q9BRH9 671 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 SLC25A33Q9BSK2 321 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 C16orf95Q9H693 158 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 IFT46Q9NQC8 304 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 EXTL2Q9UBQ6 330 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 ZNF221Q9UK13 617 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 GAB2Q9UQC2 676 aa8.67□□□□□ -1.02
ATG4B-219ENST00000479941 CLPSL1A2RUU4 121 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 MEIS3P1A6NDR6 274 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 OR8U9P0C7N5 309 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 TMEM11P17152 192 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 LSAMPQ13449 338 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 SNX29P2Q8IUI4 249 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 LAX1Q8IWV1 398 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 OR8U1Q8NH10 309 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 MCFD2Q8NI22 146 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 GPX8Q8TED1 209 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 SNAPC3Q92966 411 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 EAF1Q96JC9 268 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 NABP2Q9BQ15 211 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 C6orf62Q9GZU0 229 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 MIXL1Q9H2W2 232 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 NECAP2Q9NVZ3 263 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 RABL2AQ9UBK7 228 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 RNF150Q9ULK6 438 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 ANAPC10Q9UM13 185 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 RABL2BQ9UNT1 228 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 OR2W1Q9Y3N9 320 aa8.66□□□□□ -1.02
ATG4B-219ENST00000479941 RBM7Q9Y580 266 aaKnown RBP8.66□□□□□ -1.02
ATG4B-219ENST00000479941 IGHV3-72A0A0B4J1Y9 119 aa8.65□□□□□ -1.02
ATG4B-219ENST00000479941 ZNF736B4DX44 427 aaPredicted RBP8.65□□□□□ -1.02
ATG4B-219ENST00000479941 FGF16O43320 207 aa8.65□□□□□ -1.02
ATG4B-219ENST00000479941 SLC22A5O76082 557 aa8.65□□□□□ -1.02
ATG4B-219ENST00000479941 MOSP00540 346 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms