RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FCGR1AP12314 374 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 MC5RP33032 325 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 SNRPGP62308 76 aaKnown RBP12.22□□□□□ -0.45
DDX56-210ENST00000479440 RIPK1Q13546 671 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 AMIGO2Q86SJ2 522 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 CCDC197Q8NCU1 140 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
DDX56-210ENST00000479440 GALMQ96C23 342 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 NEURL2Q9BR09 285 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 IFI27L2Q9H2X8 130 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 PEMTQ9UBM1 199 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
DDX56-210ENST00000479440 WASHC3Q9Y3C0 194 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 FRAS1Q86XX4 4008 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 PCLOQ9Y6V0 5065 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 NUPR2A6NF83 97 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 FAM90A7PA6NKC0 464 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 FAM90A23PA8MXZ1 464 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 H7C2Y5 167 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 FCN1O00602 326 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 RAB29O14966 203 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 OR2A4O95047 310 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 SPDEFO95238 335 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 GLAP06280 429 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 CSN3P07498 182 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 AADACP22760 399 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 GRPEL2Q8TAA5 225 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 ZNF184Q99676 751 aaPredicted RBP12.21□□□□□ -0.45
DDX56-210ENST00000479440 RNF5Q99942 180 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 ST6GALNAC5Q9BVH7 336 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 STEAP1Q9UHE8 339 aa12.21□□□□□ -0.45
DDX56-210ENST00000479440 H0YJW9 148 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 BRI3O95415 125 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 RPEL1Q2QD12 228 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 DMKNQ6E0U4 476 aaPredicted RBP12.2□□□□□ -0.46
DDX56-210ENST00000479440 GHSRQ92847 366 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 SRD5A3Q9H8P0 318 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 ABRACLQ9P1F3 81 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 PEF1Q9UBV8 284 aaKnown RBP12.2□□□□□ -0.46
DDX56-210ENST00000479440 OAZ3Q9UMX2 235 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 LRRC42Q9Y546 428 aa12.2□□□□□ -0.46
DDX56-210ENST00000479440 UBE2QL1A1L167 161 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 AIREO43918 545 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 C6orf141Q5SZD1 244 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
DDX56-210ENST00000479440 TSNAXQ99598 290 aaKnown RBP12.19□□□□□ -0.46
DDX56-210ENST00000479440 CKLFQ9UBR5 152 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 ORC6Q9Y5N6 252 aa12.19□□□□□ -0.46
DDX56-210ENST00000479440 ST8SIA5O15466 376 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 ATP8B1O43520 1251 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 GPX5O75715 221 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 FUT3P21217 361 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 ALDH3A2P51648 485 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 PMS2P11Q13670 270 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 FXYD3Q14802 87 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 PSG5Q15238 335 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 RPL39P5Q59GN2 51 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 AWAT2Q6E213 333 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 RPL22L1Q6P5R6 122 aaKnown RBP12.18□□□□□ -0.46
DDX56-210ENST00000479440 GLIPR1L1Q6UWM5 242 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 GLDNQ6ZMI3 551 aaPredicted RBP12.18□□□□□ -0.46
DDX56-210ENST00000479440 DEFB125Q8N687 156 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 MUL1Q969V5 352 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 SELENOIQ9C0D9 397 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 SLC23A1Q9UHI7 598 aa12.18□□□□□ -0.46
DDX56-210ENST00000479440 A0A0B4J203 849 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 PDCD6O75340 191 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 MGMTP16455 207 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 FSTP19883 344 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
DDX56-210ENST00000479440 HMGN3Q15651 99 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 CCDC58Q4VC31 144 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 JAGN1Q8N5M9 183 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 BVESQ8NE79 360 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 OR5AN1Q8NGI8 311 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 DYNLRB2Q8TF09 96 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 IL1F10Q8WWZ1 152 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
DDX56-210ENST00000479440 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 OR11H12B2RN74 326 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 CRTAPO75718 401 aaPredicted RBP12.16□□□□□ -0.46
DDX56-210ENST00000479440 CD7P09564 240 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 CPEP16870 476 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 IGFBP3P17936 291 aaPredicted RBP12.16□□□□□ -0.46
DDX56-210ENST00000479440 LGALS7P47929 136 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 OR5T1Q8NG75 326 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 KCTD12Q96CX2 325 aaKnown RBP12.16□□□□□ -0.46
DDX56-210ENST00000479440 CENPNQ96H22 339 aaPredicted RBP12.16□□□□□ -0.46
DDX56-210ENST00000479440 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 Q96M66 194 aa12.16□□□□□ -0.46
DDX56-210ENST00000479440 TINAGL1Q9GZM7 467 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms