RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 YPEL2Q96QA6 119 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 ZNF816-ZNF321PA0A0X1KG74 233 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 SYNGR3O43761 229 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 MYF5P13349 255 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 HNF1AP20823 631 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 CD38P28907 300 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 NBL1P41271 181 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 UBE2G2P60604 165 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 RNPS1Q15287 305 aaKnown RBP11.69□□□□□ -0.54
NPHP4-207ENST00000470763 KIAA0895LQ68EN5 471 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 IL1F10Q8WWZ1 152 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 NEIL1Q96FI4 390 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-207ENST00000470763 ERRFI1Q9UJM3 462 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-207ENST00000470763 TP53TG3Q9ULZ0 132 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 SPTBN4Q9H254 2564 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 FAM186AA6NE01 2351 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 GPR179Q6PRD1 2367 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 B4GALT1P15291 398 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 CHRNB4P30926 498 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 LCN2P80188 198 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 MMDQ15546 238 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 NUFIP2Q7Z417 695 aaKnown RBP11.69□□□□□ -0.54
NPHP4-207ENST00000470763 ANKRD37Q7Z713 158 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
NPHP4-207ENST00000470763 SGMS2Q8NHU3 365 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
NPHP4-207ENST00000470763 ZDHHC11Q9H8X9 412 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 GPR27Q9NS67 375 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 IL36GQ9NZH8 169 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 NAPSAO96009 420 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 ACSF3Q4G176 576 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-207ENST00000470763 C20orf204Q6ZNR8 217 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 LINC01551Q86U37 167 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 OR1F12Q8NHA8 337 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 OR51B6Q9H340 312 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 TMEM9BQ9NQ34 198 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
NPHP4-207ENST00000470763 CTXND1A0A1B0GTU2 59 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 C11orf94C9JXX5 98 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 SERF1AO75920 110 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 ZNF32P17041 273 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 LINC00310P59036 64 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 COL5A1-AS1Q5SY13 56 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 UBALD1Q8TB05 177 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 PPP1R3CQ9UQK1 317 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 ZFP30Q9Y2G7 519 aa11.68□□□□□ -0.54
NPHP4-207ENST00000470763 F2Z2F3 143 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 CLDN1O95832 211 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 CBLN1P23435 193 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 TPPP2P59282 170 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 CFHR1Q03591 330 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 HLA-BQ31612 363 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FRYQ5TBA9 3013 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FBXW9Q5XUX1 488 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 TMPRSS7Q7RTY8 843 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 TRAV39A0A0B4J263 110 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 hCG_38984A0A1B0GV85 526 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 SOX8P57073 446 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FFAR4Q5NUL3 377 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 RHBDD2Q6NTF9 364 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 PCSK4Q6UW60 755 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 ASCL5Q7RTU5 278 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 ALKBH3Q96Q83 286 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FGF21Q9NSA1 209 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 G3V3Y1 287 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 WNT2P09544 360 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 S100GP29377 79 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 UBE2NP61088 152 aaKnown RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FAM27BQ5VT28 67 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 FOXL2NBQ6ZUU3 175 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 MRPL52Q86TS9 123 aaKnown RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 ZNF501Q96CX3 271 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 CIB3Q96Q77 187 aaPredicted RBP11.67□□□□□ -0.54
NPHP4-207ENST00000470763 RNF114Q9Y508 228 aa11.67□□□□□ -0.54
NPHP4-207ENST00000470763 SP9P0CG40 484 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 ATP5G3P48201 142 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 PRDX4Q13162 271 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 Q6ZVH6 145 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 ZNF709Q8N972 641 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 OR5P3Q8WZ94 311 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 SGCZQ96LD1 299 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 ELOVL5Q9NYP7 299 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 ATP23Q9Y6H3 246 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 USF3Q68DE3 2245 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 OTOGLQ3ZCN5 2332 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 RBFOX2O43251 390 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPHP4-207ENST00000470763 NDUFB4O95168 129 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 VENTXO95231 258 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 KIR2DS4P43632 304 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms