RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-227	ENST00000470563	ZNF860	A6NHJ4	632 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563		A6NIZ1	184 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	LINC00587	B1AMM8	73 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RNASEK-C17orf49	H0YIS7	233 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	XKRY	O14609	159 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RS1	O15537	224 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RHBDL1	O75783	438 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	SFT2D2	O95562	160 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CA1	P00915	261 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CSTA	P01040	98 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CGA	P01215	116 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	MAS1	P04201	325 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	SFTA3	P0C7M3	94 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	ASAH2B	P0C7U1	165 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	SEC11B	P0C7V7	166 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	PGAM2	P15259	253 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	ZNF14	P17017	642 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CRABP1	P29762	137 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	P2RY2	P41231	377 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	HAAO	P46952	286 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	KCNJ3	P48549	501 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	DNASE1L1	P49184	302 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	ATP5I	P56385	69 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RIPPLY3	P57055	190 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RAP1B	P61224	184 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RAP1A	P62834	184 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	IGLV3-21	P80748	117 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	PPP1R1A	Q13522	171 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RUNX3	Q13761	415 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	ZNF239	Q16600	458 aa	Known RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563		Q3ZCU0	254 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	HMGN2P46	Q86SG4	172 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	NAA40	Q86UY6	237 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	SLC22A24	Q8N4F4	322 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	KIR3DL3	Q8N743	410 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	UBAC2	Q8NBM4	344 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CCDC54	Q8NEL0	328 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	OR4A4P	Q8NGN8	299 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	NUBPL	Q8TB37	319 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	SLC22A8	Q8TCC7	542 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	PAQR8	Q8TEZ7	354 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	LCN9	Q8WX39	176 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CPNE4	Q96A23	557 aa	Predicted RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	BMF	Q96LC9	184 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563		Q96M85	177 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	OR2A5	Q96R48	311 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CMSS1	Q9BQ75	279 aa	Known RBP	4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	SULT4A1	Q9BR01	284 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	DOCK9	Q9BZ29	2069 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	MAGT1	Q9H0U3	335 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	ARV1	Q9H2C2	271 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	RGCC	Q9H4X1	137 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	TAF9B	Q9HBM6	251 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	NIT2	Q9NQR4	276 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	CYTL1	Q9NRR1	136 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	DEC1	Q9P2X7	70 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	VSIG4	Q9Y279	399 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	PIGL	Q9Y2B2	252 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	FLVCR1	Q9Y5Y0	555 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563		R4GMQ9	66 aa		4.08	□□□□□ -1.76
RBM39-227	ENST00000470563	PHF3	Q92576	2039 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	YLPM1	P49750	1951 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	C2orf16	Q68DN1	1984 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563		A0A1B0GU03	582 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563		A0A1W2PQD3	144 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	ARGFX	A6NJG6	315 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563		B4DEV8	164 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	SEC14L6	B5MCN3	397 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	HCRTR1	O43613	425 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	CXCL13	O43927	109 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	NDUFS6	O75380	124 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	MED6	O75586	246 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	RPP14	O95059	124 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	FARS2	O95363	451 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	MUC1	P15941	1255 aa	Predicted RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	RAB5A	P20339	215 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	S100A2	P29034	98 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	PEBP1	P30086	187 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	KIR3DL2	P43630	455 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	RPS15	P62841	145 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	RPS21	P63220	83 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	CXCL6	P80162	114 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	DEFA6	Q01524	100 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	ZNF117	Q03924	483 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	GLO1	Q04760	184 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	KLRB1	Q12918	225 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	SLC10A1	Q14973	349 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	PDGFRL	Q15198	375 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	SGCA	Q16586	387 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	SCGB2B2	Q4G0G5	96 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	TRMT12	Q53H54	448 aa	Known RBP	4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	GLYATL3	Q5SZD4	288 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	HIST2H3PS2	Q5TEC6	136 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	GPR157	Q5UAW9	335 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	VIT	Q6UXI7	678 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	TRAPPC6B	Q86SZ2	158 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	LYPD6	Q86Y78	171 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	TMEM123	Q8N131	208 aa		4.07	□□□□□ -1.76
RBM39-227	ENST00000470563	LRRC18	Q8N456	261 aa		4.07	□□□□□ -1.76

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