RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ACSM3Q53FZ2 586 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 RPL39P5Q59GN2 51 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 RBM48Q5RL73 367 aaKnown RBP16.33■□□□□ 0.2
COL9A3-207ENST00000467819 SVOPQ8N4V2 548 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 MINDY2Q8NBR6 621 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 ABHD5Q8WTS1 349 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 NICN1Q9BSH3 213 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 TMED9Q9BVK6 235 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 ERGIC3Q9Y282 383 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 SMAD5-AS1Q9Y6J3 95 aa16.33■□□□□ 0.2
COL9A3-207ENST00000467819 SOX15O60248 233 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 SAP30O75446 220 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 SLURP1P55000 103 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 RCN1Q15293 331 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 GLT8D1Q68CQ7 371 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 FAM71F2Q6NXP2 309 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 GLDNQ6ZMI3 551 aaPredicted RBP16.32■□□□□ 0.2
COL9A3-207ENST00000467819 LRRTM1Q86UE6 522 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 PARP12Q9H0J9 701 aaKnown RBP16.32■□□□□ 0.2
COL9A3-207ENST00000467819 PLCXD1Q9NUJ7 323 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 PIPOXQ9P0Z9 390 aa16.32■□□□□ 0.2
COL9A3-207ENST00000467819 RRHO14718 337 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 RAB29O14966 203 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 UNC119Q13432 240 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 C1orf100Q5SVJ3 147 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 ZNF429Q86V71 674 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 DLX4Q92988 240 aaPredicted RBP16.31■□□□□ 0.2
COL9A3-207ENST00000467819 ABHD14BQ96IU4 210 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 SLC23A1Q9UHI7 598 aa16.31■□□□□ 0.2
COL9A3-207ENST00000467819 FOXA2Q9Y261 457 aaPredicted RBP16.31■□□□□ 0.2
COL9A3-207ENST00000467819 NAPSAO96009 420 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 CT45A6P0DMU7 189 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 CT45A5P0DMU8 189 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 CT45A7P0DMV0 189 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 CX3CL1P78423 397 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 C19orf54Q5BKX5 351 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 ZNF660Q6AZW8 331 aaPredicted RBP16.3■□□□□ 0.2
COL9A3-207ENST00000467819 KCNG3Q8TAE7 436 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 FBLIM1Q8WUP2 373 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 TM2D1Q9BX74 207 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 FKBP14Q9NWM8 211 aa16.3■□□□□ 0.2
COL9A3-207ENST00000467819 OR5H14A6NHG9 310 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 LINC01619G3V211 115 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 H0YJW9 148 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 H7C2Y5 167 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 FCN1O00602 326 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 GSTP1P09211 210 aaKnown RBP16.29■□□□□ 0.2
COL9A3-207ENST00000467819 CRIP2P52943 208 aaPredicted RBP16.29■□□□□ 0.2
COL9A3-207ENST00000467819 ZNF880Q6PDB4 577 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 MS4A15Q8N5U1 240 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 PHYHIPQ92561 330 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 CLCC1Q96S66 551 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 MND1Q9BWT6 205 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 TOLLIPQ9H0E2 274 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
COL9A3-207ENST00000467819 DNAH7Q8WXX0 4024 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 IGHV4OR15-8A0A075B7B6 117 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 A0A087WW49 117 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 A0A0A6YYD4 124 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 LGALS1P09382 135 aaKnown RBP16.28■□□□□ 0.2
COL9A3-207ENST00000467819 SPNP16150 400 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 HSD17B12Q53GQ0 312 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 MOB1BQ7L9L4 216 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 OVCH2Q7RTZ1 564 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 CEACAM19Q7Z692 300 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 TCTEX1D1Q8N7M0 179 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 HDHD3Q9BSH5 251 aaPredicted RBP16.28■□□□□ 0.2
COL9A3-207ENST00000467819 FAM103A1Q9BTL3 118 aaKnown RBP16.28■□□□□ 0.2
COL9A3-207ENST00000467819 OR1A1Q9P1Q5 309 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 GAB2Q9UQC2 676 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 WASHC3Q9Y3C0 194 aa16.28■□□□□ 0.2
COL9A3-207ENST00000467819 TMEM14DPA8MWL7 114 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 C3orf84H3BNL1 204 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 SLC22A1O15245 554 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 IGHV3-11P01762 117 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 CDK1P06493 297 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 EGR2P11161 476 aaPredicted RBP16.27■□□□□ 0.2
COL9A3-207ENST00000467819 SRMP19623 302 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 MC5RP33032 325 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 QRFPP83859 136 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 PPP1R27Q86WC6 154 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 SBSPONQ8IVN8 264 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 ARPC1AQ92747 370 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 AK3Q9UIJ7 227 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 NUBP2Q9Y5Y2 271 aa16.27■□□□□ 0.2
COL9A3-207ENST00000467819 SOCS1O15524 211 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 HSPA12AO43301 675 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 BPNT1O95861 308 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 SNRPBP14678 240 aaKnown RBP16.26■□□□□ 0.19
COL9A3-207ENST00000467819 HLA-DRB3P79483 266 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 TMEM267Q0VDI3 215 aaPredicted RBP16.26■□□□□ 0.19
COL9A3-207ENST00000467819 ACTBL2Q562R1 376 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 OGFRL1Q5TC84 451 aaPredicted RBP16.26■□□□□ 0.19
COL9A3-207ENST00000467819 UNQ5815/PRO19632Q6UWF5 114 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 DRAXINQ8NBI3 349 aaPredicted RBP16.26■□□□□ 0.19
COL9A3-207ENST00000467819 MS4A10Q96PG2 267 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 LPAR5Q9H1C0 372 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 GHITMQ9H3K2 345 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 TPSG1Q9NRR2 321 aa16.26■□□□□ 0.19
COL9A3-207ENST00000467819 METTL1Q9UBP6 276 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 511 ms