RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 G3V318 75 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 I3L521 148 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 ITGB1BP1O14713 200 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 NBR2O15453 112 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 RGS10O43665 173 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 RGS11O94810 467 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 CT45A6P0DMU7 189 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 CT45A5P0DMU8 189 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 CT45A7P0DMV0 189 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
PTPRF-211ENST00000467464 CPEP16870 476 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 VDAC1P21796 283 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 MAP2K4P45985 399 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 LUMP51884 338 aaPredicted RBP9.32□□□□□ -0.92
PTPRF-211ENST00000467464 CRIP2P52943 208 aaPredicted RBP9.32□□□□□ -0.92
PTPRF-211ENST00000467464 FABP5Q01469 135 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 RPL39P5Q59GN2 51 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 FAM131AQ6UXB0 335 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 PRSS48Q7RTY5 328 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 OR2AK2Q8NG84 335 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 IL1F10Q8WWZ1 152 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 OR51J1Q9H342 316 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 GNB4Q9HAV0 340 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 OR1A1Q9P1Q5 309 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 SLC23A1Q9UHI7 598 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 HSF4Q9ULV5 492 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 TPRKBQ9Y3C4 175 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 AK6Q9Y3D8 172 aaKnown RBP9.32□□□□□ -0.92
PTPRF-211ENST00000467464 RYR3Q15413 4870 aa9.32□□□□□ -0.92
PTPRF-211ENST00000467464 SHISA3A0PJX4 238 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 H0YJW9 148 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 SOX15O60248 233 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 EGR2P11161 476 aaPredicted RBP9.31□□□□□ -0.92
PTPRF-211ENST00000467464 ARSBP15848 533 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 CLDN12P56749 244 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 HLA-DRB3P79483 266 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 RUNX1Q01196 453 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 SSX1Q16384 188 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 PLAC9Q5JTB6 97 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 ZNF491Q8N8L2 437 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 MINDY2Q8NBR6 621 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 ABHD14BQ96IU4 210 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 MGLLQ99685 303 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 CHCHD6Q9BRQ6 235 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 PECRQ9BY49 303 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 Q9N2K0 584 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 PLEKHJ1Q9NW61 149 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 ABRACLQ9P1F3 81 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 WSB1Q9Y6I7 421 aa9.31□□□□□ -0.92
PTPRF-211ENST00000467464 RAB29O14966 203 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 ARL6IP5O75915 188 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 SCTP09683 121 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 HSMCR30P0CW71 290 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 OR5H8P0DN80 308 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 PSMA1P25786 263 aaKnown RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 TBCEQ15813 527 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 RAB11BQ15907 218 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 GLDNQ6ZMI3 551 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 OR5AN1Q8NGI8 311 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 DPF1Q92782 380 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 PTX4Q96A99 478 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 ARHGAP5-AS1Q96IT6 56 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 B9D2Q9BPU9 175 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 C11orf54Q9H0W9 315 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 RIMS4Q9H426 269 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 PLGRKTQ9HBL7 147 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 CHMP1AQ9HD42 196 aaPredicted RBP9.3□□□□□ -0.92
PTPRF-211ENST00000467464 PARP11Q9NR21 331 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 PIPOXQ9P0Z9 390 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 STEAP1Q9UHE8 339 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 SCOCQ9UIL1 159 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 KCNK7Q9Y2U2 307 aa9.3□□□□□ -0.92
PTPRF-211ENST00000467464 TRAV41A0A0B4J266 112 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 TMEM272A0A1B0GTI8 110 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 OR5H14A6NHG9 310 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 FCN1O00602 326 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 RRHO14718 337 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
PTPRF-211ENST00000467464 VEGFCP49767 419 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 RAB25P57735 213 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 LINC00205P59089 165 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 GNB1P62873 340 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 DGCR2P98153 550 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 TRAM1Q15629 374 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 C2orf76Q3KRA6 126 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 LIN54Q6MZP7 749 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 CD200R1LQ6Q8B3 271 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 OR5M8Q8NGP6 311 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 SETD6Q8TBK2 473 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 FAM3DQ96BQ1 224 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 TOLLIPQ9H0E2 274 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 FBXL15Q9H469 300 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 C12orf4Q9NQ89 552 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 GAB2Q9UQC2 676 aa9.29□□□□□ -0.92
PTPRF-211ENST00000467464 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
PTPRF-211ENST00000467464 CEACAM6P40199 344 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms