RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■□□□□ 11.2
ATG4B-213ENST00000460211 TMEM95Q3KNT9 176 aa11.88□□□□□ -0.51
ATG4B-213ENST00000460211 ZNF833PQ6ZTB9 187 aa11.88□□□□□ -0.51
ATG4B-213ENST00000460211 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
ATG4B-213ENST00000460211 LGALS14Q8TCE9 139 aa11.88□□□□□ -0.51
ATG4B-213ENST00000460211 RASL11BQ9BPW5 248 aa11.88□□□□□ -0.51
ATG4B-213ENST00000460211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.88□□□□□ -0.51
ATG4B-213ENST00000460211 RHBDL2Q9NX52 303 aa11.88□□□□□ -0.51
ATG4B-213ENST00000460211 SAA2-SAA4A0A096LPE2 208 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-213ENST00000460211 TRIM64CA6NLI5 447 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 DIRAS3O95661 229 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
ATG4B-213ENST00000460211 SAA2P0DJI9 122 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-213ENST00000460211 DTYMKP23919 212 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 OR3A3P47888 321 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 HACD4Q5VWC8 232 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 ODF3L1Q8IXM7 274 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 OR10J5Q8NHC4 309 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
ATG4B-213ENST00000460211 C11orf54Q9H0W9 315 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-213ENST00000460211 IFI27L2Q9H2X8 130 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
ATG4B-213ENST00000460211 OR1A1Q9P1Q5 309 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 ZNF221Q9UK13 617 aa11.87□□□□□ -0.51
ATG4B-213ENST00000460211 ZNF736B4DX44 427 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-213ENST00000460211 BET1O15155 118 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 GSTT2P0CG29 244 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 GSTT2BP0CG30 244 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 CD28P10747 220 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 GNG2P59768 71 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 LSM3P62310 102 aaKnown RBP11.86□□□□□ -0.51
ATG4B-213ENST00000460211 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 SLC35E3Q7Z769 313 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 Q8N6K4 173 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 CHPT1Q8WUD6 406 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 ZNF251Q9BRH9 671 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 GINS4Q9BRT9 223 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 DCSTAMPQ9H295 470 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 RDH8Q9NYR8 311 aa11.86□□□□□ -0.51
ATG4B-213ENST00000460211 A0A0A6YYH2 397 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 A6NJ64 397 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 OPN1MWP04001 364 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 OPN1MW2P0DN77 364 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 OPN1MW3P0DN78 364 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 MC5RP33032 325 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 GPR12P47775 334 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 Q6ZS49 121 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 NDUFA11Q86Y39 141 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 Q8N9W7 124 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-213ENST00000460211 WIPF2Q8TF74 440 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-213ENST00000460211 ABHD14BQ96IU4 210 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 AGMATQ9BSE5 352 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 ABCG5Q9H222 651 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 ZNF230Q9UIE0 474 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-213ENST00000460211 SPATA2Q9UM82 520 aa11.85□□□□□ -0.51
ATG4B-213ENST00000460211 RBM7Q9Y580 266 aaKnown RBP11.85□□□□□ -0.51
ATG4B-213ENST00000460211 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 IGKV1-6A0A0C4DH72 117 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 PSMB11A5LHX3 300 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 OR5H14A6NHG9 310 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 IGHG2P01859 326 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 CTXN2P0C2S0 81 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 RPS19P39019 145 aaKnown RBP11.84□□□□□ -0.51
ATG4B-213ENST00000460211 SLC35B1P78383 322 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 MMDQ15546 238 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 ZNF260Q3ZCT1 412 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 RPL39P5Q59GN2 51 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 IGSF11Q5DX21 431 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 HIST2H2BDQ6DRA6 164 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 OR5H6Q8NGV6 325 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 MAFIPQ8WZ33 124 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-213ENST00000460211 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 GON7Q9BXV9 100 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 TOLLIPQ9H0E2 274 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 PARP12Q9H0J9 701 aaKnown RBP11.84□□□□□ -0.51
ATG4B-213ENST00000460211 PLSCR3Q9NRY6 295 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 KIAA1456Q9P272 454 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 RNF150Q9ULK6 438 aa11.84□□□□□ -0.51
ATG4B-213ENST00000460211 TET2Q6N021 2002 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-213ENST00000460211 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 TMEM235A6NFC5 223 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 H7C2Y5 167 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 AP4M1O00189 453 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 TSPAN15O95858 294 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 CT45A6P0DMU7 189 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 CT45A5P0DMU8 189 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 CT45A7P0DMV0 189 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 SOX6P35712 828 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 F2RL1P55085 397 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms